Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0788
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HR04 Cluster: PolyQ domain-containing hypothetical co...    85   1e-15
UniRef50_Q7K1Q6 Cluster: LD47410p; n=2; Sophophora|Rep: LD47410p...    72   2e-11
UniRef50_UPI00015B469D Cluster: PREDICTED: similar to polyQ doma...    69   2e-10
UniRef50_Q8VE76 Cluster: Papolg protein; n=5; Euarchontoglires|R...    33   7.2  
UniRef50_A1D7J7 Cluster: SRF-type transcription factor RlmA; n=2...    33   7.2  
UniRef50_Q6YNQ6 Cluster: 30kDa protein; n=1; Botrytis virus X|Re...    33   9.5  
UniRef50_A6WGL2 Cluster: Type IV pilus assembly PilZ; n=1; Kineo...    33   9.5  
UniRef50_Q22PB8 Cluster: Putative uncharacterized protein; n=2; ...    33   9.5  

>UniRef50_Q1HR04 Cluster: PolyQ domain-containing hypothetical
           conserved protein; n=2; Aedes aegypti|Rep: PolyQ
           domain-containing hypothetical conserved protein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 484

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
 Frame = +2

Query: 221 ARGQLPRWPDYVRY-FDRALWVVEKCARWAVP---PPLDQDERP----QPELIRPLPWVF 376
           A+    R  +YV + FD  L VVEK A+W++P   PP ++D        P LIRPLPW+ 
Sbjct: 30  AQAMTTRVGNYVYHRFDTCLSVVEKTAKWSLPQSPPPSEEDTSKVNISPPPLIRPLPWIM 89

Query: 377 FLMMLIALRITRETISLANLIMGKPPLRSADVVMYIQSKRRYLRPSSTRG 526
           FL  LIALR+ R ++SL  L++GK P+   ++V ++QS+RR LR    RG
Sbjct: 90  FLPALIALRLIRASLSLVALMIGKQPVYPENMVAFLQSRRRKLRALKYRG 139


>UniRef50_Q7K1Q6 Cluster: LD47410p; n=2; Sophophora|Rep: LD47410p -
           Drosophila melanogaster (Fruit fly)
          Length = 320

 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 56/87 (64%)
 Frame = +2

Query: 266 DRALWVVEKCARWAVPPPLDQDERPQPELIRPLPWVFFLMMLIALRITRETISLANLIMG 445
           D+AL ++E  A+W++P    QD+   P L RPLPW  FLM+++ LR+TR  +S+  L++G
Sbjct: 59  DKALAMIEDTAKWSLP----QDKSSAP-LERPLPWAPFLMLIVLLRLTRIWLSVGALMIG 113

Query: 446 KPPLRSADVVMYIQSKRRYLRPSSTRG 526
             P+   D+V +IQ++RR LR     G
Sbjct: 114 NGPISPTDMVYFIQTRRRKLRAIRVHG 140


>UniRef50_UPI00015B469D Cluster: PREDICTED: similar to polyQ
           domain-containing hypothetical conserved protein; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to polyQ
           domain-containing hypothetical conserved protein -
           Nasonia vitripennis
          Length = 494

 Score = 68.5 bits (160), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
 Frame = +2

Query: 251 YVRYFDRALWVVEKCARWAVPPP-LDQDERPQP----ELIRPLPWVFFLMMLIALRITRE 415
           ++R  DR LW+VEK  +W++P   +   E  +     +L+RPLPW+ FL  L+ LRI R 
Sbjct: 55  FLRLIDRILWIVEKSVQWSLPSEEVSAKENGKTFGKADLVRPLPWIIFLPALLFLRIIRI 114

Query: 416 TISLANLIMGKPPLRSADVVMYIQSKRRYLRPSSTRG 526
            +     I+G P +  +D+V  IQ  RR +R   + G
Sbjct: 115 GLDALGAILGYPQVEPSDMVRVIQRGRRRIRAIKSSG 151


>UniRef50_Q8VE76 Cluster: Papolg protein; n=5; Euarchontoglires|Rep:
           Papolg protein - Mus musculus (Mouse)
          Length = 262

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 422 KSSLE*FAEQLASSERIPRAEGGSVLVAGARLDPKVEARPISHISRPPTMLYRNTV 255
           +SS E  A  +     +P A+G S+ V GA++DP  +A     +   PT++ RN +
Sbjct: 91  RSSAEPVAVVVEKLPSVPPAQGLSIPVIGAKVDPTAKAVSSPAVCTIPTVVGRNVI 146


>UniRef50_A1D7J7 Cluster: SRF-type transcription factor RlmA; n=2;
           Trichocomaceae|Rep: SRF-type transcription factor RlmA -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 600

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +3

Query: 504 YGPQVPGEPHXASPHQHRQPAPRH 575
           YGPQ P  PH   PH   QP P H
Sbjct: 218 YGPQQPLPPHAMPPHTMPQPVPPH 241


>UniRef50_Q6YNQ6 Cluster: 30kDa protein; n=1; Botrytis virus X|Rep:
           30kDa protein - Botrytis virus X
          Length = 278

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 492 NVDIYGPQVPGEPHXASPHQHRQPAPRHLVQRDQIDV*IHHVLPQT 629
           NV IY P  P  P   +P Q  +P P          V +HH  P+T
Sbjct: 121 NVIIYAPPTPSPPPPPAPTQPTRPTPGPAFFPQPFKVELHHPTPKT 166


>UniRef50_A6WGL2 Cluster: Type IV pilus assembly PilZ; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Type IV pilus
           assembly PilZ - Kineococcus radiotolerans SRS30216
          Length = 232

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -2

Query: 380 ERIPRAEGGSVLVAGARLDPKVEARPISHISRPPTMLYRNTVRSLASAVADRVL 219
           ER+  A+GG ++  G  +D  V   P + +   P   +  TVRS  +  A  V+
Sbjct: 13  ERMDGAQGGMLMTEGPAIDTTVTLMPTTAVDGAPASWHTGTVRSWTAGAAGLVV 66


>UniRef50_Q22PB8 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1375

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -2

Query: 272  LYRNTVRSLASAVADRVLCQSLKHFLYQVHVWHIKKFGIEFEYKNG**ECITSQITDCLN 93
            LY N+++     +    + QS K  LY   +W I    I+ +Y NG  E I+  I+D L 
Sbjct: 1256 LYSNSIQQQGIFLIQSTIEQSQKSMLYPQCIWEINSNLIQVQYSNGILEQIS--ISDNLG 1313

Query: 92   I-YYYNRFS 69
            I  ++N+ S
Sbjct: 1314 IKIFFNKSS 1322


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,359,089
Number of Sequences: 1657284
Number of extensions: 13034761
Number of successful extensions: 37759
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37731
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)