Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0788
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 319 FGSRRAPATRTDPPSALGILSDDANCSANHSRDDFT 426
           +G    P+T   PP +LG +     C  + +  ++T
Sbjct: 203 YGPEPVPSTPYPPPGSLGSMGVSVPCGTSGNPLEWT 238


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 371 VFFLMMLIALRITRETISLANLIMGKPPLRSADVVM 478
           ++F   L+++    E IS+ NLI  +     AD+++
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLII 164


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 371 VFFLMMLIALRITRETISLANLIMGKPPLRSADVVM 478
           ++F   L+++    E IS+ NLI  +     AD+++
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLII 164


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 371 VFFLMMLIALRITRETISLANLIMGKPPLRSADVVM 478
           ++F   L+++    E IS+ NLI  +     AD+++
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLII 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,899
Number of Sequences: 336
Number of extensions: 3313
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)