Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0788
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821... 32 0.53
09_04_0568 + 18591757-18592251 30 2.2
12_01_1111 + 11842837-11843094,11843142-11843255,11843267-118442... 29 3.8
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 29 3.8
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 29 3.8
04_04_1296 + 32437089-32437386,32437422-32437429 29 5.0
11_06_0016 - 19284810-19284926,19285527-19286879 28 6.6
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 28 6.6
11_06_0011 + 19245742-19246440,19248361-19249170 28 8.7
06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083 28 8.7
02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421 28 8.7
>10_08_0883 +
21279913-21280235,21281066-21281327,21281998-21282199,
21282289-21282436,21282541-21283084
Length = 492
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 605 SNIDLIPLYQVSRGWLAVLVRARXMRFPWY 516
SN L+PL V WLA++ M FPWY
Sbjct: 405 SNAFLLPLLAVLTPWLAIIGMFFVMAFPWY 434
>09_04_0568 + 18591757-18592251
Length = 164
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = -3
Query: 604 QTSI*SRCTRCRG----AGWRCWCGLAXCG 527
+TS +RC+RCR G+RC CG CG
Sbjct: 98 KTSAVNRCSRCRKRVGLTGFRCRCGHLFCG 127
>12_01_1111 +
11842837-11843094,11843142-11843255,11843267-11844247,
11861747-11862025,11862998-11863098,11863723-11863792,
11863947-11863974,11864057-11864114,11864440-11864536
Length = 661
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 DKGNASDFGRARGQLPRWPDYVRYFDRALW 280
D G R L RWP+Y R D+ LW
Sbjct: 412 DNGMGGAIMRRAEALARWPEYQRLVDQELW 441
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 278 WVVEKCARWAVPPPLDQDERPQPELIRPLP 367
W + KC R+A PPP P P + P P
Sbjct: 37 WRLAKCPRFAPPPPQPTLPPPPPRTLPPPP 66
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 DKGNASDFGRARGQLPRWPDYVRYFDRALW 280
D G R L RWP+Y R D+ LW
Sbjct: 347 DNGMGGAIMRRAEALARWPEYQRLVDQELW 376
>04_04_1296 + 32437089-32437386,32437422-32437429
Length = 101
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 347 LVAGARLDPKVEARPISHISRPPTMLYRNTVRSLASAVA 231
+VA RL P+ +P S + PP +L R + R L +AVA
Sbjct: 27 VVASVRLGPE-SMQPASAMQAPPQLLLRYSNRHLRNAVA 64
>11_06_0016 - 19284810-19284926,19285527-19286879
Length = 489
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 311 PPPLDQDERPQPELIRPLPWVFFLMMLIAL 400
PPP RP P L LP+ F+L ++L
Sbjct: 90 PPPPPPPPRPAPSLASALPFWFYLTAAVSL 119
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 477 CTYKANV-DIYGPQVPGEPHXASPHQHRQPAPRHLVQ 584
C Y N+ + + G P A H Q AP HLV+
Sbjct: 169 CVYSDNMPEFFAADATGNPREAPEEGHGQRAPPHLVR 205
>11_06_0011 + 19245742-19246440,19248361-19249170
Length = 502
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 483 YKANVDIYGPQVPGEPHXASPHQHRQPAPRHLVQR 587
Y+ V GP G+P A +H++ A RHL++R
Sbjct: 59 YQPQVVSLGPFHHGDPGLAPMEEHKRRALRHLLRR 93
>06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083
Length = 240
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 589 SRCTRCRGAGWRC 551
SRC+R G GWRC
Sbjct: 157 SRCSRVNGRGWRC 169
>02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421
Length = 247
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 589 SRCTRCRGAGWRC 551
SRC+R G GWRC
Sbjct: 169 SRCSRVNGRGWRC 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,191,540
Number of Sequences: 37544
Number of extensions: 372709
Number of successful extensions: 1167
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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