BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0788 (726 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g35710.2 68415.m04379 glycogenin glucosyltransferase (glycoge... 31 0.59 At2g35710.1 68415.m04380 glycogenin glucosyltransferase (glycoge... 31 0.59 At4g16600.1 68417.m02511 glycogenin glucosyltransferase (glycoge... 29 2.4 At4g11230.1 68417.m01819 respiratory burst oxidase, putative / N... 29 4.1 At2g42040.1 68415.m05199 expressed protein 28 7.2 At1g32260.1 68414.m03969 expressed protein identical to hypothet... 28 7.2 >At2g35710.2 68415.m04379 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-2 from Homo sapiens [SP|O15488] Length = 389 Score = 31.5 bits (68), Expect = 0.59 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -2 Query: 611 VNSNIDLIPLYQVSRGWLAVLVRARXMRFPWY----LRAVNIYVCFVCT*P 471 ++ N L+P V WL +L M FPWY +RA++++ C P Sbjct: 300 ISINTLLLPTLPVLTPWLGILGTLLVMAFPWYPDGVVRALSVFAYAFCCAP 350 >At2g35710.1 68415.m04380 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-2 from Homo sapiens [SP|O15488] Length = 497 Score = 31.5 bits (68), Expect = 0.59 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -2 Query: 611 VNSNIDLIPLYQVSRGWLAVLVRARXMRFPWY----LRAVNIYVCFVCT*P 471 ++ N L+P V WL +L M FPWY +RA++++ C P Sbjct: 408 ISINTLLLPTLPVLTPWLGILGTLLVMAFPWYPDGVVRALSVFAYAFCCAP 458 >At4g16600.1 68417.m02511 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-1 from Rattus norvegicus [SP|O08730], Homo sapiens [GI:496895], Mus musculus [SP|Q9R062] Length = 442 Score = 29.5 bits (63), Expect = 2.4 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 362 EGGSVLVAGARLDPKVEARPISHISRPPTMLYRNTVRSLASAVADRVLCQSLK 204 E + + A K + RP H + TM+Y T R VA RVL +SLK Sbjct: 36 ENANAMTAVMERGLKTQRRP-EHKNAYATMMYMGTPRDYEFYVATRVLIRSLK 87 >At4g11230.1 68417.m01819 respiratory burst oxidase, putative / NADPH oxidase, putative similar to respiratory burst oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868] from Arabidopsis thaliana, respiratory burst oxidase homolog [GI:16549087] from Solanum tuberosum; contains Pfam profile PF01794 Ferric reductase like transmembrane component Length = 941 Score = 28.7 bits (61), Expect = 4.1 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 571 DTWYSGIRSMFEFTMCFRRHSLSYNNNPGNASSXDEVLV 687 D W S + S EFT F +Y+ +P ++SS E L+ Sbjct: 12 DRWGSDLASAGEFTQSFPSLPATYSPSPSSSSSSGEELL 50 >At2g42040.1 68415.m05199 expressed protein Length = 269 Score = 27.9 bits (59), Expect = 7.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -3 Query: 589 SRCTRCRGAGWRC 551 SRC+R G GWRC Sbjct: 167 SRCSRVNGRGWRC 179 >At1g32260.1 68414.m03969 expressed protein identical to hypothetical protein GB:AAF81322 GI:8920600 from [Arabidopsis thaliana] Length = 202 Score = 27.9 bits (59), Expect = 7.2 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = -2 Query: 314 EARPISHISRPPTMLYRNTVRSLASAVADRVLCQSLKHFLYQ 189 +A+ ++ +SRP + + NT ++ + +DR L SLKHF ++ Sbjct: 104 KAKRLTELSRPKS--HTNTTQTPQNRESDRHLFTSLKHFRHK 143 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,262,699 Number of Sequences: 28952 Number of extensions: 282085 Number of successful extensions: 768 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 768 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1584903024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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