Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0786
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0258 - 11153709-11156090                                         29   2.5  
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240...    28   7.6  
06_01_1000 - 7778907-7780721                                           28   7.6  
01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709...    28   7.6  

>05_03_0258 - 11153709-11156090
          Length = 793

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +2

Query: 293 IFDSLKERTGLFNKPELTTFEGF---YTLKDQAIEATDRLIEXATNSPTRPMVEIFDELS 463
           +FDS+K+ +GL   P+L T+      Y   +++ EA +++++   +S  +P V  ++ + 
Sbjct: 623 MFDSIKQ-SGL--SPDLITYNSLMDMYAKSNESWEA-EKILKQLKSSQVKPDVVSYNTVI 678

Query: 464 DTLCKVADLAEFVRILT 514
           +  CK   + E  RIL+
Sbjct: 679 NGFCKQGLIKEAQRILS 695


>07_03_1764 +
           29322683-29323387,29323809-29323889,29323968-29324072,
           29324453-29325382,29326728-29326856,29326953-29327042,
           29327237-29327293,29327362-29327394
          Length = 709

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 151 ILSKEAV*QMLYYQSKLIEAQHTI*TRNALQIIF 50
           + SKE +  +LY + K +EA +T  TRN  Q ++
Sbjct: 279 VYSKEWLDSLLYVRPKALEASYTGRTRNGSQALY 312


>06_01_1000 - 7778907-7780721
          Length = 604

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +2

Query: 254 LATAFNTRPNSRPIFDSLKERTGLFNKPELTTFEGFYTLKDQA--IEATDRLIEXATNSP 427
           L   F  +      ++ L+E   +  +P++ T+    +   +A    A D L+    +  
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453

Query: 428 TRPMVEIFDELSDTLCKVADLAEFVRIL 511
            +P V  F  L    CKV  + E +RIL
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRIL 481


>01_01_0900 +
           7091970-7092068,7092175-7093131,7093210-7093968,
           7094322-7094366
          Length = 619

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = +2

Query: 293 IFDSLKERTGLFNKPELTTFEGFYTLKDQAIEATDRLIEXATNSPTRPMVEIFDELSDTL 472
           +FD + E  G+   P++ +      ++ Q  E  + L+        RP V  F  +    
Sbjct: 388 VFDKMIE-AGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGW 446

Query: 473 CKVADLAEFVRI 508
           C VAD+   VR+
Sbjct: 447 CSVADMGNAVRV 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,680
Number of Sequences: 37544
Number of extensions: 321775
Number of successful extensions: 833
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)