Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0786
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 35 0.059
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 35 0.059
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 35 0.059
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 30 1.7
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.1
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 6.8
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 6.8
AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related... 28 6.8
AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related ... 28 6.8
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z71266-10|CAA95838.3| 491|Caenorhabditis elegans Hypothetical p... 27 9.0
>AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical
protein Y67H2A.7 protein.
Length = 692
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 299 DSLKERTGLFNKPELTTFEGFYTLKDQAIEATDRLI-EXATNSPT-RPMVEIFDELSDTL 472
+ + + TGLF L T E F L ++TD LI E T S R ++I D++S+ +
Sbjct: 26 EKVDKETGLFGNKNLKTAESFNELPAAVKKSTDALIQELLTPSQNPRTSIQIVDDISNEI 85
Query: 473 CKVADLAEFVRIL 511
CK ADLAE VR L
Sbjct: 86 CKSADLAECVRQL 98
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 481 CRSC*VCE---DTHPQPHFARAAEEACISISGVVEKLNTHKGLYEALKKS 621
C+S + E H +P F AAE+ + +VE LNT+ LY+ LK S
Sbjct: 86 CKSADLAECVRQLHSEPEFRNAAEDVSRNFCELVESLNTNTALYQKLKSS 135
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 532 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAE 660
R EEA + +EK++ ++ LYEA KKS EN S KHL E
Sbjct: 578 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE 619
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 532 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAE 660
R EEA + +EK++ ++ LYEA KKS EN S KHL E
Sbjct: 244 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE 285
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 532 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAE 660
R EEA + +EK++ ++ LYEA KKS EN S KHL E
Sbjct: 578 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE 619
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +2
Query: 164 ESXNEV--IETPLDPPKWQKEEIGMLCQYL 247
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +2
Query: 164 ESXNEV--IETPLDPPKWQKEEIGMLCQYL 247
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +2
Query: 164 ESXNEV--IETPLDPPKWQKEEIGMLCQYL 247
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 294 IGLEF-GLVLNAVAKVTKY*QSIPISSFCH-FGGSRGVSITSLXLSRYNLYYQRK 136
IG E +V++ V ++T+ QS+ H FGG G TSL + R ++ Y +K
Sbjct: 110 IGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKK 164
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 CSVSTWSPWQQHSTPDQILG 290
CS STW+ WQ+ ST + G
Sbjct: 2812 CSTSTWNAWQEWSTCTETCG 2831
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 CSVSTWSPWQQHSTPDQILG 290
CS STW+ WQ+ ST + G
Sbjct: 2812 CSTSTWNAWQEWSTCTETCG 2831
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 CSVSTWSPWQQHSTPDQILG 290
CS STW+ WQ+ ST + G
Sbjct: 2812 CSTSTWNAWQEWSTCTETCG 2831
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 CSVSTWSPWQQHSTPDQILG 290
CS STW+ WQ+ ST + G
Sbjct: 2812 CSTSTWNAWQEWSTCTETCG 2831
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +2
Query: 233 LCQYLVTLATAF-NTRPNSRPIFDSLKERTGLFNKPELTTFEGFYTLKDQAIEATDRLIE 409
L +YL T F N R + + K RT + N+ F L+ + +RL+E
Sbjct: 773 LAKYLETRLEFFDNVREHVSNL--PFKTRTDISNRIREAVKGRFRELRRARVIPLNRLVE 830
Query: 410 XATNSPTRPMVEIFDE---LSDTLCKVADLAE 496
T S + FDE +D L K +DL+E
Sbjct: 831 RITESRDADLWSYFDEKADAADVLEKSSDLSE 862
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +2
Query: 233 LCQYLVTLATAF-NTRPNSRPIFDSLKERTGLFNKPELTTFEGFYTLKDQAIEATDRLIE 409
L +YL T F N R + + K RT + N+ F L+ + +RL+E
Sbjct: 773 LAKYLETRLEFFDNVREHVSNL--PFKTRTDISNRIREAVKGRFRELRRARVIPLNRLVE 830
Query: 410 XATNSPTRPMVEIFDE---LSDTLCKVADLAE 496
T S + FDE +D L K +DL+E
Sbjct: 831 RITESRDADLWSYFDEKADAADVLEKSSDLSE 862
>AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
b protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 535 AAEEACISI--SGVVEKLNTHKGLYEALKKSVENGTSGDKHLA 657
AA++A I + SG V L+ YE L K+ E + GD+H A
Sbjct: 483 AAKDAKIGLRMSGKVAGLDAFMPFYENLLKNYEQYSMGDEHFA 525
>AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
a protein.
Length = 660
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 535 AAEEACISI--SGVVEKLNTHKGLYEALKKSVENGTSGDKHLA 657
AA++A I + SG V L+ YE L K+ E + GD+H A
Sbjct: 483 AAKDAKIGLRMSGKVAGLDAFMPFYENLLKNYEQYSMGDEHFA 525
>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical
protein R05H10.6 protein.
Length = 1364
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 443 EIFDELSDTLCKVADLAEFVRILTPNHISHELLKKPVSALVE 568
E FD+L D + + LAE I P HIS + + P LVE
Sbjct: 694 ERFDDLDDEMDLLVALAENPTISVPVHISLKKNRNPRIDLVE 735
>Z71266-10|CAA95838.3| 491|Caenorhabditis elegans Hypothetical
protein R06C7.7 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 173 NEVIETPLDPPKWQKEEIGMLCQYLVTLATAFN 271
+++ + P+DP W+K ++G + + LA FN
Sbjct: 292 DQLAKDPIDPMIWRKVKVGQKFELIDPLAQQFN 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,507,703
Number of Sequences: 27780
Number of extensions: 293519
Number of successful extensions: 765
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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