Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0785
(454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 70 1e-12
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 38 0.004
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 38 0.004
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 38 0.004
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 36 0.012
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 36 0.012
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 36 0.012
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 36 0.012
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 36 0.015
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 36 0.015
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 36 0.015
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 36 0.020
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 36 0.020
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 36 0.020
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736 35 0.027
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 35 0.027
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 35 0.035
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 35 0.035
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 35 0.035
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 34 0.047
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 34 0.062
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 33 0.14
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 32 0.25
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 31 0.33
09_04_0652 - 19227686-19227926,19229368-19232294 30 0.76
02_02_0473 - 10727908-10728052,10728367-10728440,10728660-107288... 29 1.3
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 29 1.7
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 29 1.7
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 29 1.7
08_02_1470 - 27350173-27350643,27350721-27351167 29 2.3
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 27 5.3
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 27 7.1
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 27 9.3
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 27 9.3
10_07_0138 + 13325418-13325954 27 9.3
04_04_0168 + 23259459-23260001,23260883-23262780,23263000-232631... 27 9.3
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 27 9.3
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDT-WA 259
MP VSVK W KE +P +E++T PV+FK Q++ LTGV PE QK++ KG L+DD W+
Sbjct: 1 MPTVSVK--WQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDADWS 58
Query: 260 IL 265
L
Sbjct: 59 TL 60
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +1
Query: 289 LVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
L+M +++ AP + FVED+ E E A+ GL NLGNTCYMN+T+QCL
Sbjct: 68 LMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQCL 122
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+NLGNTC+MN+ +QCL
Sbjct: 350 GLLNLGNTCFMNSAIQCL 367
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 394 PEGLINLGNTCYMNATVQCL 453
P GL+NLGN+CY NA +QCL
Sbjct: 378 PFGLVNLGNSCYANAVLQCL 397
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +1
Query: 397 EGLINLGNTCYMNATVQCL 453
+G++NLGNTCY+N+ VQCL
Sbjct: 193 KGILNLGNTCYLNSLVQCL 211
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+MN+ VQCL
Sbjct: 272 GLDNLGNTCFMNSAVQCL 289
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 36.3 bits (80), Expect = 0.012
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ NLGNTCY+N+ VQCL
Sbjct: 302 GITNLGNTCYLNSLVQCL 319
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 298 GSKEEDVP--AAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
G D P AAPV++ V +N+ + +P GL N GN C++N+++Q L
Sbjct: 283 GGPAIDTPTTAAPVDE--LVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQAL 334
>07_01_0426 +
3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 36.3 bits (80), Expect = 0.012
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+MN+++QCL
Sbjct: 263 GLENLGNTCFMNSSIQCL 280
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 328 PVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
P E T F ++ P GL NLGN+CY NA +QCL
Sbjct: 427 PSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQCL 468
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 35.9 bits (79), Expect = 0.015
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 370 ELATAMDMPEGLINLGNTCYMNATVQCL 453
+L + + P GL NLG TCY N+ +QCL
Sbjct: 118 DLRDSTETPAGLTNLGATCYANSILQCL 145
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 35.9 bits (79), Expect = 0.015
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 394 PEGLINLGNTCYMNATVQCL 453
P GL N GN+CY NA +QCL
Sbjct: 352 PRGLFNCGNSCYANAVLQCL 371
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 35.5 bits (78), Expect = 0.020
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ NLGNTCY+NA +QCL
Sbjct: 570 GMPNLGNTCYLNALLQCL 587
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 35.5 bits (78), Expect = 0.020
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 92 VSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDD 250
+ +K+K ++ VN L K +I +TG+ E Q+++C+G L+DD
Sbjct: 103 IEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDD 155
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 35.5 bits (78), Expect = 0.020
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTCY+N+ +QCL
Sbjct: 101 GLQNLGNTCYLNSVLQCL 118
>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
Length = 869
Score = 35.1 bits (77), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ NLGNTCY+NA +QCL
Sbjct: 304 GIPNLGNTCYVNALLQCL 321
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 35.1 bits (77), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ NLGNTCY+NA +QCL
Sbjct: 341 GMPNLGNTCYINALLQCL 358
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 34.7 bits (76), Expect = 0.035
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 83 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCK 229
+P + VKVK+ +Y ++ +N+ K Q+ A TG+ PE QK+V K
Sbjct: 45 VPTIRVKVKFNG-VYHEIYINSQASFGELKKQLSAPTGLHPEDQKIVYK 92
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 34.7 bits (76), Expect = 0.035
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 397 EGLINLGNTCYMNATVQCL 453
+G+ NLGNTCY+N+ +QCL
Sbjct: 298 KGIPNLGNTCYLNSLMQCL 316
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 34.7 bits (76), Expect = 0.035
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 397 EGLINLGNTCYMNATVQCL 453
+G+ NLGNTCY+N+ +QCL
Sbjct: 244 KGIPNLGNTCYLNSLLQCL 262
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 34.3 bits (75), Expect = 0.047
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ N GNTCY+NA +QCL
Sbjct: 206 GIPNFGNTCYLNAVLQCL 223
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 33.9 bits (74), Expect = 0.062
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N GNTCY+N+ +QCL
Sbjct: 139 GLQNFGNTCYLNSVLQCL 156
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 32.7 bits (71), Expect = 0.14
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 391 MPEGLINLGNTCYMNATVQCL 453
+P GL+N GN+C+ N +QCL
Sbjct: 202 LPCGLLNCGNSCFANVVLQCL 222
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 31.9 bits (69), Expect = 0.25
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+MN+ +Q L
Sbjct: 312 GLHNLGNTCFMNSAIQSL 329
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 131 DVEVNTDDEPVLFKAQIFALTGVQPEXQKVV 223
+VE +T+ + + QIF+LT V PE QK+V
Sbjct: 24 EVEYDTEHGLDILRLQIFSLTSVPPELQKIV 54
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 30.3 bits (65), Expect = 0.76
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+ NA +Q L
Sbjct: 226 GLPNLGNTCFFNAVMQSL 243
>02_02_0473 - 10727908-10728052,10728367-10728440,10728660-10728818,
10729606-10729774,10730216-10730355,10730469-10730879,
10731055-10731334,10731508-10731571,10731995-10733281,
10733363-10733822,10733988-10734356
Length = 1185
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 300 Q*RGRRASSTSGTDTFCRRHE*S*TG-YSHGYAR 398
Q RGRR SS SGT T R + S T Y G+AR
Sbjct: 971 QRRGRRTSSWSGTTTASRAYRRSRTSTYGTGFAR 1004
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N GNTCY N+ +Q L
Sbjct: 24 GLENFGNTCYCNSVLQAL 41
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N GNTCY N+ +Q L
Sbjct: 24 GLENFGNTCYCNSVLQAL 41
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N GNTCY N+ +Q L
Sbjct: 73 GLENFGNTCYCNSVLQAL 90
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 83 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVV 223
+P + VKVK+ +Y ++ +N+ K + TG+ P+ QKVV
Sbjct: 39 VPTIRVKVKYNG-VYHEIYINSQASFGELKKLLSEKTGLHPDDQKVV 84
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGN C++N +Q L
Sbjct: 629 GLKNLGNNCFLNVILQAL 646
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 83 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCK 229
+P + VKVK + ++ +N+ K + A TG+ P+ QKV+ K
Sbjct: 57 VPTIRVKVKHAGITH-EIYINSQASFGELKKMVAARTGLHPDDQKVMYK 104
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 190 GLKNQGATCYMNSLLQTL 207
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 200 GLKNQGATCYMNSLLQTL 217
>10_07_0138 + 13325418-13325954
Length = 178
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 111 GARKCTQMWR*IQTMNRYCSRR 176
GAR+C++ WR + CSRR
Sbjct: 83 GARRCSRRWRRSRRWRSRCSRR 104
>04_04_0168 +
23259459-23260001,23260883-23262780,23263000-23263150,
23263851-23264669
Length = 1136
Score = 26.6 bits (56), Expect = 9.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 104 VKWGKEMYPDVEVNTDDEPVLF 169
++W E+ PD+E+ TD +F
Sbjct: 527 LRWDVEVIPDIEITTDGSKYIF 548
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 173 GLKNQGATCYMNSLLQTL 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,548,248
Number of Sequences: 37544
Number of extensions: 260119
Number of successful extensions: 578
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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