Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0785
(454 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 37 0.009
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 36 0.021
SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.027
SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.027
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.027
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022) 35 0.027
SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 33 0.15
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_8927| Best HMM Match : UCH (HMM E-Value=0) 31 0.34
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 31 0.59
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 30 0.78
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_997| Best HMM Match : Hexapep (HMM E-Value=6.8e-15) 27 5.5
SB_21866| Best HMM Match : UCH (HMM E-Value=0) 27 5.5
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) 27 7.3
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_9010| Best HMM Match : RVP (HMM E-Value=0.14) 27 9.6
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 78.6 bits (185), Expect = 2e-15
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +1
Query: 286 VLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
+++MGS D+P APV +T F+EDM+EA+LA+A +P GL NLGNTCYMNATVQCL
Sbjct: 61 LMMMGSVG-DIPTAPVRKTVFMEDMSEAQLASAFKLPAGLNNLGNTCYMNATVQCL 115
Score = 68.1 bits (159), Expect = 3e-12
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +2
Query: 95 SVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDT 253
SV VKWGKE + VE+NTD+ P +FKAQ+FAL+ V PE QKV+ KG L+ T
Sbjct: 8 SVNVKWGKEKFGGVELNTDEPPQVFKAQLFALSSVPPERQKVMLKGAVLQGVT 60
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTCYMN+ +QCL
Sbjct: 697 GLRNLGNTCYMNSVLQCL 714
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 35.5 bits (78), Expect = 0.021
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+MNA +QCL
Sbjct: 465 GLENLGNTCFMNAGLQCL 482
>SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 35.1 bits (77), Expect = 0.027
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 385 MDMPEGLINLGNTCYMNATVQCL 453
+ + GL NLGNTCY+NAT+Q L
Sbjct: 52 LGLVRGLKNLGNTCYLNATLQML 74
>SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 35.1 bits (77), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+MN+ +QCL
Sbjct: 223 GLANLGNTCFMNSGLQCL 240
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 35.1 bits (77), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+NLGNTCYMN+ +Q L
Sbjct: 404 GLVNLGNTCYMNSVLQSL 421
>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
Length = 340
Score = 35.1 bits (77), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N+GNTCYMNA +Q L
Sbjct: 124 GLMNIGNTCYMNAALQAL 141
>SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 34.7 bits (76), Expect = 0.036
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GLINLGNTC+MN VQ L
Sbjct: 40 GLINLGNTCFMNCIVQAL 57
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTCYMN+ +Q L
Sbjct: 216 GLRNLGNTCYMNSVLQVL 233
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N GNTC++NA +QCL
Sbjct: 1950 GLKNHGNTCFINAIIQCL 1967
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 32.3 bits (70), Expect = 0.19
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 391 MPEGLINLGNTCYMNATVQCL 453
M GL NLGNTC++N+ VQ L
Sbjct: 114 MGPGLSNLGNTCFLNSVVQVL 134
>SB_8927| Best HMM Match : UCH (HMM E-Value=0)
Length = 316
Score = 31.5 bits (68), Expect = 0.34
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N GNTCY N+ +Q L
Sbjct: 24 GLVNFGNTCYCNSVLQAL 41
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 409 NLGNTCYMNATVQCL 453
NLGNTCYMNA +Q L
Sbjct: 608 NLGNTCYMNAILQSL 622
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 30.3 bits (65), Expect = 0.78
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 346 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQ 447
FV+ +N + P G N+GNTC+ +A +Q
Sbjct: 219 FVDPVNPYDRKRVEGTPVGFKNVGNTCWFSAVIQ 252
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+INLG TCYM + +Q L
Sbjct: 1123 GIINLGATCYMASCIQQL 1140
>SB_997| Best HMM Match : Hexapep (HMM E-Value=6.8e-15)
Length = 916
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDD 250
V V G E+ DV+V D +P+L + G+ + V GVTL DD
Sbjct: 481 VDVVDGVELLDDVDVVDDGDPLLDNVDVVEDVGLLEDVD--VVDGVTLLDD 529
>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
Length = 2165
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 1257 GLKNAGATCYMNSVIQQL 1274
>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
Length = 543
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCY+N+ +Q L
Sbjct: 43 GLQNQGGTCYLNSLIQTL 60
>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 282 GLKNQGATCYMNSLLQTL 299
>SB_9010| Best HMM Match : RVP (HMM E-Value=0.14)
Length = 711
Score = 26.6 bits (56), Expect = 9.6
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +1
Query: 226 QRSHITG*HMGNFKLTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGL 405
QR+ G M NF L L +++ P + VEQ VE M + + + G
Sbjct: 366 QRNQKEGERMDNFVSELKRLSLTW---KKETPVSTVEQENQVESMGQGDRGGDPHLYFGS 422
Query: 406 INLGNTCYMNAT 441
+ LG N+T
Sbjct: 423 VELGTVSSPNST 434
>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 6 GLKNAGATCYMNSVLQQL 23
>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N G TCYMN+ +Q L
Sbjct: 6 GLKNAGATCYMNSVLQQL 23
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,766,616
Number of Sequences: 59808
Number of extensions: 306746
Number of successful extensions: 711
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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