Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0785
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 64 3e-11
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 64 3e-11
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 64 3e-11
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 37 0.008
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 34 0.056
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 33 0.074
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 33 0.074
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 33 0.097
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 33 0.097
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 32 0.17
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 31 0.30
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 31 0.30
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 31 0.52
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 31 0.52
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 30 0.91
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.1
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 28 3.7
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 28 3.7
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 28 3.7
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 28 3.7
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 28 3.7
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 28 3.7
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 28 3.7
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 3.7
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 27 4.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 6.4
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDTW 256
V VKW KE Y VEV+T P++FKAQ+FALT V PE QKVV G TL DD W
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDW 55
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LTNNALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATV 444
+ N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ V
Sbjct: 60 IKENMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCV 117
Query: 445 QCL 453
Q L
Sbjct: 118 QML 120
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDTW 256
V VKW KE Y VEV+T P++FKAQ+FALT V PE QKVV G TL DD W
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDW 55
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LTNNALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATV 444
+ N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ V
Sbjct: 60 IKENMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCV 117
Query: 445 QCL 453
Q L
Sbjct: 118 QML 120
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDTW 256
V VKW KE Y VEV+T P++FKAQ+FALT V PE QKVV G TL DD W
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDW 55
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LTNNALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATV 444
+ N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ V
Sbjct: 60 IKENMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCV 117
Query: 445 QCL 453
Q L
Sbjct: 118 QML 120
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N+GNTC+M+AT+QCL
Sbjct: 25 GLFNMGNTCFMSATLQCL 42
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.056
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 346 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
F+ N E +++ +P GL N GNTCYMNA +Q L
Sbjct: 29 FLTSRNGEEASSSRLVP-GLANQGNTCYMNALLQGL 63
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 33.5 bits (73), Expect = 0.074
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 361 NEAELATAMDMPE--GLINLGNTCYMNATVQCL 453
+ A+L+ + P GL+N GN CY NA +QCL
Sbjct: 556 SNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCL 588
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.074
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 394 PEGLINLGNTCYMNATVQCL 453
P G+ N+GNTC+MNA +Q L
Sbjct: 377 PRGMRNVGNTCFMNAVLQAL 396
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.097
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N GN CY NA +QCL
Sbjct: 568 GLVNYGNFCYRNAGIQCL 585
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.097
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N GN CY NA +QCL
Sbjct: 568 GLVNYGNFCYRNAGIQCL 585
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 32.3 bits (70), Expect = 0.17
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G +N GNTCYMNA +Q L
Sbjct: 183 GYLNFGNTCYMNAVLQLL 200
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 32.3 bits (70), Expect = 0.17
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N GNTCY N+ +Q L
Sbjct: 28 GLVNFGNTCYCNSVIQAL 45
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL N+GNTC+MNA +Q L
Sbjct: 424 GLRNIGNTCFMNAVLQML 441
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL NLGNTC+M + QCL
Sbjct: 276 GLSNLGNTCFMASAFQCL 293
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 30.7 bits (66), Expect = 0.52
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 388 DMPEGLINLGNTCYMNATVQ 447
D P GLIN GN CY+N+ +Q
Sbjct: 105 DQPAGLINGGNFCYVNSFLQ 124
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 30.7 bits (66), Expect = 0.52
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 388 DMPEGLINLGNTCYMNATVQ 447
D P GLIN GN CY+N+ +Q
Sbjct: 105 DQPAGLINGGNFCYVNSFLQ 124
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 29.9 bits (64), Expect = 0.91
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N G++CYMN+ +Q L
Sbjct: 320 GLVNTGSSCYMNSVLQAL 337
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 28.7 bits (61), Expect = 2.1
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 403 LINLGNTCYMNATVQCL 453
L+N GN+C++N+T+Q L
Sbjct: 147 LVNTGNSCFLNSTMQAL 163
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 2.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 388 DMPEGLINLGNTCYMNATVQCL 453
++ + L+N GN+CY N+T+Q +
Sbjct: 31 ELRKRLVNTGNSCYYNSTLQAM 52
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 403 LINLGNTCYMNATVQCL 453
L+N GN+CY N+T+Q +
Sbjct: 216 LVNTGNSCYYNSTMQAV 232
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 299 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 397
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 403 LINLGNTCYMNATVQCL 453
L N GN+CY N+T+Q L
Sbjct: 284 LYNTGNSCYFNSTMQAL 300
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 403 LINLGNTCYMNATVQCL 453
L+N GN+CY N+T+Q +
Sbjct: 216 LVNTGNSCYYNSTMQAV 232
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 197 VQPEXQKVVCKGVTLRDDTWAILN*RITP*YLSWAVKRKTCQQHQWNRHV 346
+ P +KV+C L + ++ L P Y WA K Q H ++HV
Sbjct: 643 ITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAY--KVLQSHGHDQHV 690
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 18 SXSVNTALSIISEKENVQNSPKCLTFQ*R*NGARKCT 128
S SVNTA S+ +E + N KC+ + + +G+ C+
Sbjct: 43 SASVNTASSVCNENDFRCNDGKCIRTEWKCDGSGDCS 79
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ N G TCYMNA +Q L
Sbjct: 1768 GMKNDGGTCYMNAMIQQL 1785
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ N G TCYMNA +Q L
Sbjct: 1765 GMKNDGGTCYMNAMIQQL 1782
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ N G TCYMNA +Q L
Sbjct: 1768 GMKNDGGTCYMNAMIQQL 1785
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
G+ N G TCYMNA +Q L
Sbjct: 1765 GMKNDGGTCYMNAMIQQL 1782
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 18 SXSVNTALSIISEKENVQNSPKCLTFQ*R*NGARKCT 128
S SVNTA S+ +E + N KC+ + + +G+ C+
Sbjct: 43 SASVNTASSVCNENDFRCNDGKCIRTEWKCDGSGDCS 79
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 134 VEVNTDDEPVLFKAQIFALTGVQPEXQKVVCKGVTLRDDTW 256
+E D V + QI A+TG QP K ++ W
Sbjct: 359 IESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEEDW 399
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 400 GLINLGNTCYMNATVQCL 453
GL+N TCY+N+ VQ L
Sbjct: 89 GLVNQAMTCYLNSLVQSL 106
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 316 VPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
VPA PVE+ +F E + E L + + C+MNA + L
Sbjct: 541 VPAEPVEEIQFDEPIEEQTLMPFLFLDNSFGQ--QNCFMNALLNML 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,784,824
Number of Sequences: 27780
Number of extensions: 228123
Number of successful extensions: 563
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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