Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0785
(454 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 0.39
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 1.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 2.7
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 22 2.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 4.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 4.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 6.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.3
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 8.3
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.0 bits (52), Expect = 0.39
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 111 HFTFTETLGISGYFARSPFQKLYLKPC 31
H+ G G+F RS QK+ +PC
Sbjct: 78 HYGVHSCEGCKGFFRRSIQQKIQYRPC 104
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.0 bits (47), Expect = 1.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 194 LSVQISAP*TVPV-HRLYSPPHLGTFPCPILPS 99
L Q+S T P+ +RLY+P + + P P PS
Sbjct: 412 LRPQVSPDRTSPMEYRLYNPALIQSQPSPQYPS 444
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 346 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 453
F D+N ++L +++P + G ++ TVQ +
Sbjct: 160 FAFDLNTSQLLKQVEIPHDVATTGKGELVSLTVQAM 195
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 87
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 78 GYFARSPFQKLYLKPC 31
G+F RS QK+ +PC
Sbjct: 40 GFFRRSIQQKIQYRPC 55
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -1
Query: 214 LXLWLDPCQCKYLRLEQYRFIVCIHLHIWVHFLAPF 107
+ LWL+P + + + FI+ + + V + PF
Sbjct: 263 MTLWLEPSSTERMIIANLNFILHLFCLLDVQWRIPF 298
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 4.7
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 327 CCWHVFLFTAH 295
CCWH F T +
Sbjct: 605 CCWHCFNCTQY 615
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 396 WHIHGCSQFSF 364
W IH CS F F
Sbjct: 79 WVIHPCSSFRF 89
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 396 WHIHGCSQFSF 364
W IH CS F F
Sbjct: 79 WVIHPCSSFRF 89
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 396 WHIHGCSQFSF 364
W IH CS F F
Sbjct: 79 WVIHPCSSFRF 89
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 329 GAAGTSSSLLPMTSTKAL 276
G + TSS + PM+ K+L
Sbjct: 1821 GTSSTSSDISPMSEQKSL 1838
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 329 GAAGTSSSLLPMTSTKAL 276
G + TSS + PM+ K+L
Sbjct: 1817 GTSSTSSDISPMSEQKSL 1834
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 20.6 bits (41), Expect = 8.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 383 PWICQR 400
PWICQR
Sbjct: 168 PWICQR 173
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,223
Number of Sequences: 438
Number of extensions: 2732
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -