Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0783
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.3  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = +1

Query: 226 VVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDES 381
           +  + PS +    T P   L   +  NP    ++ P+S   P +N  +  +S
Sbjct: 319 MTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNIQNLSQS 370


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 608 VNLIDSDIIIVFVGLLPNVSW 670
           ++L  +D+I  F+ +LP ++W
Sbjct: 80  LHLSIADLITAFLSVLPQLAW 100


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 294 GCGKCTLRWRLGNR 253
           GC KCT + + G+R
Sbjct: 74  GCSKCTEKQKEGSR 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,662
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)