BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0783 (682 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 31 0.12 SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 29 0.82 SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 27 1.9 SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 2.5 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.3 SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 4.4 SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 26 5.8 SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 7.7 SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.7 >SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2|Schizosaccharomyces pombe|chr 1|||Manual Length = 750 Score = 31.5 bits (68), Expect = 0.12 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%) Frame = +1 Query: 205 YKNSVRKVVHVIPSAISISQT-------PPQCALPAALLKNPSSVPNVQPASTQKPRSNS 363 ++ + K +H +PS++ S PP+ L LL PS + N+Q ++T+ SNS Sbjct: 21 FQVDMEKTMHALPSSLLDSPLLSTNEHYPPKSTL---LLSGPSPIRNIQLSATKSSESNS 77 Query: 364 ISF-DESQETF 393 I + ++Q F Sbjct: 78 IDYLTDTQNIF 88 >SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 889 Score = 28.7 bits (61), Expect = 0.82 Identities = 25/106 (23%), Positives = 42/106 (39%) Frame = +2 Query: 350 LDLTRYHSTSRRKPSAWISKLVIXXXXXXXXXXXXXACHRKLANVSLALSFRRCGLFVKL 529 L+++ S+S +K W K+++ ++A V L + R+ V Sbjct: 614 LNMSHLVSSSNQKLRIWEEKILMILNSRDSNNKYMLISSIQMAGVFLGVFIRKDDHLVVS 673 Query: 530 ARAKHNKKTCLTGHHFLFRSLVGAVEVNLIDSDIIIVFVGLLPNVS 667 K +KT G F A+E+N+ DSD V P V+ Sbjct: 674 KVTKTTRKTGFGG--FSANKGAVAIEMNVCDSDFCFVSSHFAPKVN 717 >SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosaccharomyces pombe|chr 3|||Manual Length = 478 Score = 27.5 bits (58), Expect = 1.9 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -3 Query: 314 EDGFFSRAAGSAHCGGVW 261 ED F+++A+G+ + GG W Sbjct: 36 EDNFYAKASGNLYLGGTW 53 >SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 690 Score = 27.1 bits (57), Expect = 2.5 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = +1 Query: 175 RNHLLNYSWRYKNSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPR 354 RNH ++ YKN V + V VI + S T P P ++ + S VP P+S+ Sbjct: 8 RNHAPDWQDFYKNGVPQEVIVIEDSASPRLT-PNLPPPFSVHQLQSFVPPQPPSSSSPST 66 Query: 355 SNSIS 369 + +++ Sbjct: 67 TGTVA 71 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 26.6 bits (56), Expect = 3.3 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +1 Query: 208 KNSVRKVVHVIPSAISISQT--PPQCALPAALLKNPSSVPNVQPASTQKP 351 K +VV + P+A + PP ++P+ +PS P + P S++ P Sbjct: 1013 KQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLP 1062 >SPBC800.10c |||EPS15 repeat family actin cortical patch component |Schizosaccharomyces pombe|chr 2|||Manual Length = 1116 Score = 26.2 bits (55), Expect = 4.4 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 193 YSWRYKNSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSN 360 Y + K S +++ V+PS++ S P L P+S+P+V PA+ P N Sbjct: 322 YLIKLKLSGKELPKVLPSSMLSSVAP----LMQKSKSVPTSIPSVVPANISSPNPN 373 >SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces pombe|chr 1|||Manual Length = 385 Score = 25.8 bits (54), Expect = 5.8 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 74 PIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGT 208 P + Q + S + V+++ + + SSTP TIYS T G T Sbjct: 108 PSSSQTISASSSTTDNVIVS--SSISSTVSSTPVSTIYSGTSGTT 150 >SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces pombe|chr 2|||Manual Length = 637 Score = 25.4 bits (53), Expect = 7.7 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 235 VIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNS 363 V+PS +IS +PP + P+ +P + S+ P S S Sbjct: 454 VVPSNTTISSSPPLTSPVKTSANIPNLLPTSELDSSNAPHSQS 496 >SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosaccharomyces pombe|chr 1|||Manual Length = 609 Score = 25.4 bits (53), Expect = 7.7 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +2 Query: 65 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGT-IYSTTPGGTRIVYERSF 232 + SP + HS+ P + A + ++++TP G Y + G + Y SF Sbjct: 256 TVSPTNEPSAHSRPSPQGTTANSSSASISSLHNTTPDGEGKYRSVQNGRALNYVSSF 312 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,797,162 Number of Sequences: 5004 Number of extensions: 56254 Number of successful extensions: 187 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 187 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 313902888 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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