Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0783
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 31 0.12
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 29 0.82
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 27 1.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 2.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.3
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 4.4
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 26 5.8
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 7.7
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.7
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +1
Query: 205 YKNSVRKVVHVIPSAISISQT-------PPQCALPAALLKNPSSVPNVQPASTQKPRSNS 363
++ + K +H +PS++ S PP+ L LL PS + N+Q ++T+ SNS
Sbjct: 21 FQVDMEKTMHALPSSLLDSPLLSTNEHYPPKSTL---LLSGPSPIRNIQLSATKSSESNS 77
Query: 364 ISF-DESQETF 393
I + ++Q F
Sbjct: 78 IDYLTDTQNIF 88
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 28.7 bits (61), Expect = 0.82
Identities = 25/106 (23%), Positives = 42/106 (39%)
Frame = +2
Query: 350 LDLTRYHSTSRRKPSAWISKLVIXXXXXXXXXXXXXACHRKLANVSLALSFRRCGLFVKL 529
L+++ S+S +K W K+++ ++A V L + R+ V
Sbjct: 614 LNMSHLVSSSNQKLRIWEEKILMILNSRDSNNKYMLISSIQMAGVFLGVFIRKDDHLVVS 673
Query: 530 ARAKHNKKTCLTGHHFLFRSLVGAVEVNLIDSDIIIVFVGLLPNVS 667
K +KT G F A+E+N+ DSD V P V+
Sbjct: 674 KVTKTTRKTGFGG--FSANKGAVAIEMNVCDSDFCFVSSHFAPKVN 717
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 27.5 bits (58), Expect = 1.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 314 EDGFFSRAAGSAHCGGVW 261
ED F+++A+G+ + GG W
Sbjct: 36 EDNFYAKASGNLYLGGTW 53
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 175 RNHLLNYSWRYKNSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPR 354
RNH ++ YKN V + V VI + S T P P ++ + S VP P+S+
Sbjct: 8 RNHAPDWQDFYKNGVPQEVIVIEDSASPRLT-PNLPPPFSVHQLQSFVPPQPPSSSSPST 66
Query: 355 SNSIS 369
+ +++
Sbjct: 67 TGTVA 71
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 208 KNSVRKVVHVIPSAISISQT--PPQCALPAALLKNPSSVPNVQPASTQKP 351
K +VV + P+A + PP ++P+ +PS P + P S++ P
Sbjct: 1013 KQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLP 1062
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 193 YSWRYKNSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSN 360
Y + K S +++ V+PS++ S P L P+S+P+V PA+ P N
Sbjct: 322 YLIKLKLSGKELPKVLPSSMLSSVAP----LMQKSKSVPTSIPSVVPANISSPNPN 373
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 74 PIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGT 208
P + Q + S + V+++ + + SSTP TIYS T G T
Sbjct: 108 PSSSQTISASSSTTDNVIVS--SSISSTVSSTPVSTIYSGTSGTT 150
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 235 VIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNS 363
V+PS +IS +PP + P+ +P + S+ P S S
Sbjct: 454 VVPSNTTISSSPPLTSPVKTSANIPNLLPTSELDSSNAPHSQS 496
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGT-IYSTTPGGTRIVYERSF 232
+ SP + HS+ P + A + ++++TP G Y + G + Y SF
Sbjct: 256 TVSPTNEPSAHSRPSPQGTTANSSSASISSLHNTTPDGEGKYRSVQNGRALNYVSSF 312
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,797,162
Number of Sequences: 5004
Number of extensions: 56254
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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