BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0783 (682 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 34 0.11 AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 34 0.11 AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 34 0.11 Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 29 4.1 AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm rece... 28 5.4 AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q (u... 28 5.4 U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 7.1 U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 7.1 AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 7.1 AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 27 9.4 >Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical protein Y76A2B.1 protein. Length = 1057 Score = 33.9 bits (74), Expect = 0.11 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 211 NSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 369 N+V + V + PS S S PP+ + + P+ VP PA+ +P SN+ S Sbjct: 380 NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAAPRPMSNNNS 432 >AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical protein Y76A2B.1 protein. Length = 1057 Score = 33.9 bits (74), Expect = 0.11 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 211 NSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 369 N+V + V + PS S S PP+ + + P+ VP PA+ +P SN+ S Sbjct: 380 NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAAPRPMSNNNS 432 >AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. Length = 1057 Score = 33.9 bits (74), Expect = 0.11 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 211 NSVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 369 N+V + V + PS S S PP+ + + P+ VP PA+ +P SN+ S Sbjct: 380 NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAAPRPMSNNNS 432 >Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein R09H10.5 protein. Length = 1603 Score = 28.7 bits (61), Expect = 4.1 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = +1 Query: 181 HLLNYSWRYKNSVRKVVHVIPSAISI-SQTPPQCALPAALLKNPSSVPNVQP--ASTQKP 351 HLL Y+ +N+ + + + I + S TP Q ++N S+PN+Q +T KP Sbjct: 396 HLLFYTIGGQNTYVQYYNNVAKNIPVQSDTPTQTTYIMMTVENGESLPNIQDTNGNTLKP 455 Query: 352 RSNSISF 372 S+ F Sbjct: 456 TSSGRRF 462 >AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm receptor protein 238 protein. Length = 335 Score = 28.3 bits (60), Expect = 5.4 Identities = 18/67 (26%), Positives = 34/67 (50%) Frame = +2 Query: 473 LANVSLALSFRRCGLFVKLARAKHNKKTCLTGHHFLFRSLVGAVEVNLIDSDIIIVFVGL 652 +A+ +++SF +F L+ + +K T LT H FRS+ + +L+ ++ F Sbjct: 204 IASTLISISFAMIVIFATLSYKEVSKLTELTSHSEKFRSIQLQLLNSLVLQSLVPAFFIQ 263 Query: 653 LPNVSWF 673 LP+ F Sbjct: 264 LPSFVLF 270 >AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q (ubiquinone) biosynthesisprotein 6 protein. Length = 451 Score = 28.3 bits (60), Expect = 5.4 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +1 Query: 1 GD*QVSSVEFCKINTTKVFNNVSVTHREAGHSQPIDSFKEGPDHGSR 141 G V + C + K F + SV +AG S + SFK G +R Sbjct: 24 GGGMVGNAMACSLGANKSFQSKSVLLLDAGRSPSLASFKPGAPFNNR 70 >U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical protein T13C2.3a protein. Length = 431 Score = 27.9 bits (59), Expect = 7.1 Identities = 22/91 (24%), Positives = 37/91 (40%) Frame = +2 Query: 119 RVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRFPKRHRNVHFPQPY 298 RV++T P +ST T +TT T + S++P ++ P+P Sbjct: 310 RVIVTIPPSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIYRPRPI 369 Query: 299 *RIRLRYPTCSRPAHKNLDLTRYHSTSRRKP 391 +++ R T P + R S SR +P Sbjct: 370 DQMKRRKQT---PKKCRVAYVRTKSGSRTRP 397 >U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical protein T13C2.3b protein. Length = 506 Score = 27.9 bits (59), Expect = 7.1 Identities = 22/91 (24%), Positives = 37/91 (40%) Frame = +2 Query: 119 RVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRFPKRHRNVHFPQPY 298 RV++T P +ST T +TT T + S++P ++ P+P Sbjct: 385 RVIVTIPPSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIYRPRPI 444 Query: 299 *RIRLRYPTCSRPAHKNLDLTRYHSTSRRKP 391 +++ R T P + R S SR +P Sbjct: 445 DQMKRRKQT---PKKCRVAYVRTKSGSRTRP 472 >AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical protein Y106G6D.3 protein. Length = 555 Score = 27.9 bits (59), Expect = 7.1 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = +2 Query: 44 PRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTP 172 PR I + +A+ + +R V + DP P YS TP Sbjct: 424 PRSIYIETGKSTYGEASKTSGNNARSVYLADPVSAPKAYSVTP 466 >AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical protein Y67D2.4 protein. Length = 313 Score = 27.5 bits (58), Expect = 9.4 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 503 RRCGLFVKLARAKHNKKTCLTGHHFLFRS 589 R F++L R + K +CL HFL+R+ Sbjct: 285 RAAKYFIQLYRNRKFKDSCLDNEHFLYRN 313 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,764,795 Number of Sequences: 27780 Number of extensions: 328693 Number of successful extensions: 886 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 886 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1550199966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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