Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0783
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49150.1 68414.m05510 hypothetical protein 31 0.93
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 2.2
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 29 3.8
At1g01400.1 68414.m00055 hypothetical protein 28 6.6
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 27 8.7
At4g37750.1 68417.m05344 ovule development protein aintegumenta ... 27 8.7
At4g08250.1 68417.m01361 scarecrow transcription factor family p... 27 8.7
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 27 8.7
At3g27180.1 68416.m03399 expressed protein 27 8.7
At1g75210.1 68414.m08737 5' nucleotidase family protein contains... 27 8.7
At1g65800.1 68414.m07467 S-receptor protein kinase, putative sim... 27 8.7
At1g35860.1 68414.m04455 chloroplast outer membrane protein-rela... 27 8.7
>At1g49150.1 68414.m05510 hypothetical protein
Length = 148
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 464 HRKLANVSLALSFRRCGLFVKLARAKHNKKTCLTGHHFLFRSLVGAVEVNLIDSDIIIVF 643
H+ + L +S R VK+ K ++ CL H L R+L+ + + + +++VF
Sbjct: 53 HKMEEKMDLLISLFRSNNEVKIGSVKPRQRACLWMDHLLMRNLIAVLVLLSLVLVVVVVF 112
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +1
Query: 229 VHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSMDL* 408
V PSA+ + T P PA + + P+ V N P Q P+S + D E S
Sbjct: 590 VSTTPSAVPEASTIPSPPAPAPVAQ-PTHVFNQTPPPEQTPKSGAARTDSEPEVSSFWTT 648
Query: 409 ASH*FSEYLKPVI 447
+ + Y P+I
Sbjct: 649 CPYCYVLYEYPII 661
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 244 SAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSM 399
S+ S+ TPP A P+ L P + P+V+PA T S S+ + SM
Sbjct: 57 SSPSVKLTPPY-ASPSVKLTPPYASPSVRPAGTTPNASPSVKLTPPYASPSM 107
>At1g01400.1 68414.m00055 hypothetical protein
Length = 204
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 143 QMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRFPKRHRNVHFPQP 295
Q PD+ SS+ GT+ S R YE ++ L R + K RN H P
Sbjct: 138 QEPDLPSSSGIGTM-SANSHDDRRAYELAYPLPSRDIQSKKELRNAHLKTP 187
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar to
CAF protein [Arabidopsis thaliana] GI:6102610; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain, PF03368: Domain of
unknown function, PF00636: RNase3 domain, PF00035:
Double-stranded RNA binding motif
Length = 1676
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 557 CLTGHHFLFRSLVGAVEVNLIDSDII-IVFVGLLPNVSWFGVS 682
C GHH+L++ + V L+ + ++ F G + + W GV+
Sbjct: 1197 CSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVN 1239
>At4g37750.1 68417.m05344 ovule development protein aintegumenta
(ANT) identical to ovule development protein
aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana]
Length = 555
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 68 ASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYS 190
+S + AT S S+P + V+ + + Y S P G IYS
Sbjct: 41 SSSTSSAATSSSSVPPQLVVGDNTSNFGVCYGSNPNGGIYS 81
>At4g08250.1 68417.m01361 scarecrow transcription factor family
protein SCARECROW - Arabidopsis thaliana, PID:g1497987
Length = 483
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 316 PKTDSSVGLREVHIAVA 266
PKTD S GLR VH+ VA
Sbjct: 94 PKTDESKGLRLVHLLVA 110
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 56 LIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTP 199
++ + P + S+P +V P +PDVYSS P YS P
Sbjct: 19 MVAAYEPYTDSSPPPYSVPLPKVEYKSPP-LPDVYSSPPPPLEYSPAP 65
>At3g27180.1 68416.m03399 expressed protein
Length = 518
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 196 SWRYKN-SVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISF 372
SW + + SV + +I S + + PP+ L A+L + SVP+++ +S+S++
Sbjct: 350 SWHHADASVNPLSWIIGSDVVVVD-PPRRGLDASLRQMLESVPSIEKRMRSSSQSSSLNA 408
Query: 373 DESQ 384
E +
Sbjct: 409 KEEK 412
>At1g75210.1 68414.m08737 5' nucleotidase family protein contains
Pfam profile: PF05761 5' nucleotidase family
Length = 642
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 62 MSASPIARQATHSQSIPSRRVLITDPAQM---PDVYSSTPGGTIYSTTPGGTRIVYERSF 232
MS I+R T S + PS + + +P + + S TP S T + S
Sbjct: 1 MSEWFISRNPTFSTAFPSSCITVVNPNFILLSSEFDSYTPQCLFNSLTTTMRLSKRQLSL 60
Query: 233 MLSLRQSRFPKRHRNVHFPQPY 298
LSL S F R R HFP Y
Sbjct: 61 PLSLCFSTFSPRSRFHHFPGKY 82
>At1g65800.1 68414.m07467 S-receptor protein kinase, putative
similar to PIR|T05180|T05180 S-receptor kinase ARK3
precursor - [Arabidopsis thaliana]
Length = 847
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 195 LLEVQE*CTKGRSCYPFGNLDFPNATAMC 281
L E +E C KG +C F N D N + C
Sbjct: 373 LKECEERCLKGCNCTAFANTDIRNGGSGC 401
>At1g35860.1 68414.m04455 chloroplast outer membrane protein-related
similar to chloroplastic outer envelope membrane protein
(OEP75) [Pisum sativum] GI:633607
Length = 399
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 86 QATHSQSIPSR--RVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRF 259
Q T +S+ R ++ DP P + SS P GTI P + RS + S+ S F
Sbjct: 142 QETDQKSVEGSADRSIVPDPGGYPSLASSQPSGTISFEHPNIKGL--NRSLIGSIATSNF 199
Query: 260 PKRHRNVHFPQPY 298
++ F Y
Sbjct: 200 LNPEDDLSFKLEY 212
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,224
Number of Sequences: 28952
Number of extensions: 299502
Number of successful extensions: 851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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