BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0783 (682 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g49150.1 68414.m05510 hypothetical protein 31 0.93 At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 2.2 At1g31250.1 68414.m03825 proline-rich family protein contains pr... 29 3.8 At1g01400.1 68414.m00055 hypothetical protein 28 6.6 At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 27 8.7 At4g37750.1 68417.m05344 ovule development protein aintegumenta ... 27 8.7 At4g08250.1 68417.m01361 scarecrow transcription factor family p... 27 8.7 At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 27 8.7 At3g27180.1 68416.m03399 expressed protein 27 8.7 At1g75210.1 68414.m08737 5' nucleotidase family protein contains... 27 8.7 At1g65800.1 68414.m07467 S-receptor protein kinase, putative sim... 27 8.7 At1g35860.1 68414.m04455 chloroplast outer membrane protein-rela... 27 8.7 >At1g49150.1 68414.m05510 hypothetical protein Length = 148 Score = 30.7 bits (66), Expect = 0.93 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = +2 Query: 464 HRKLANVSLALSFRRCGLFVKLARAKHNKKTCLTGHHFLFRSLVGAVEVNLIDSDIIIVF 643 H+ + L +S R VK+ K ++ CL H L R+L+ + + + +++VF Sbjct: 53 HKMEEKMDLLISLFRSNNEVKIGSVKPRQRACLWMDHLLMRNLIAVLVLLSLVLVVVVVF 112 >At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226: DnaJ domain Length = 797 Score = 29.5 bits (63), Expect = 2.2 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = +1 Query: 229 VHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSMDL* 408 V PSA+ + T P PA + + P+ V N P Q P+S + D E S Sbjct: 590 VSTTPSAVPEASTIPSPPAPAPVAQ-PTHVFNQTPPPEQTPKSGAARTDSEPEVSSFWTT 648 Query: 409 ASH*FSEYLKPVI 447 + + Y P+I Sbjct: 649 CPYCYVLYEYPII 661 >At1g31250.1 68414.m03825 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; similar to prolin rich protein GB:S44189 GI:433706 from [Zea mays] Length = 165 Score = 28.7 bits (61), Expect = 3.8 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +1 Query: 244 SAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSM 399 S+ S+ TPP A P+ L P + P+V+PA T S S+ + SM Sbjct: 57 SSPSVKLTPPY-ASPSVKLTPPYASPSVRPAGTTPNASPSVKLTPPYASPSM 107 >At1g01400.1 68414.m00055 hypothetical protein Length = 204 Score = 27.9 bits (59), Expect = 6.6 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +2 Query: 143 QMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRFPKRHRNVHFPQP 295 Q PD+ SS+ GT+ S R YE ++ L R + K RN H P Sbjct: 138 QEPDLPSSSGIGTM-SANSHDDRRAYELAYPLPSRDIQSKKELRNAHLKTP 187 >At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar to CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF03368: Domain of unknown function, PF00636: RNase3 domain, PF00035: Double-stranded RNA binding motif Length = 1676 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +2 Query: 557 CLTGHHFLFRSLVGAVEVNLIDSDII-IVFVGLLPNVSWFGVS 682 C GHH+L++ + V L+ + ++ F G + + W GV+ Sbjct: 1197 CSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVN 1239 >At4g37750.1 68417.m05344 ovule development protein aintegumenta (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] Length = 555 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 68 ASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYS 190 +S + AT S S+P + V+ + + Y S P G IYS Sbjct: 41 SSSTSSAATSSSSVPPQLVVGDNTSNFGVCYGSNPNGGIYS 81 >At4g08250.1 68417.m01361 scarecrow transcription factor family protein SCARECROW - Arabidopsis thaliana, PID:g1497987 Length = 483 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -1 Query: 316 PKTDSSVGLREVHIAVA 266 PKTD S GLR VH+ VA Sbjct: 94 PKTDESKGLRLVHLLVA 110 >At3g28550.1 68416.m03565 proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 1018 Score = 27.5 bits (58), Expect = 8.7 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +2 Query: 56 LIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTP 199 ++ + P + S+P +V P +PDVYSS P YS P Sbjct: 19 MVAAYEPYTDSSPPPYSVPLPKVEYKSPP-LPDVYSSPPPPLEYSPAP 65 >At3g27180.1 68416.m03399 expressed protein Length = 518 Score = 27.5 bits (58), Expect = 8.7 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +1 Query: 196 SWRYKN-SVRKVVHVIPSAISISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISF 372 SW + + SV + +I S + + PP+ L A+L + SVP+++ +S+S++ Sbjct: 350 SWHHADASVNPLSWIIGSDVVVVD-PPRRGLDASLRQMLESVPSIEKRMRSSSQSSSLNA 408 Query: 373 DESQ 384 E + Sbjct: 409 KEEK 412 >At1g75210.1 68414.m08737 5' nucleotidase family protein contains Pfam profile: PF05761 5' nucleotidase family Length = 642 Score = 27.5 bits (58), Expect = 8.7 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Frame = +2 Query: 62 MSASPIARQATHSQSIPSRRVLITDPAQM---PDVYSSTPGGTIYSTTPGGTRIVYERSF 232 MS I+R T S + PS + + +P + + S TP S T + S Sbjct: 1 MSEWFISRNPTFSTAFPSSCITVVNPNFILLSSEFDSYTPQCLFNSLTTTMRLSKRQLSL 60 Query: 233 MLSLRQSRFPKRHRNVHFPQPY 298 LSL S F R R HFP Y Sbjct: 61 PLSLCFSTFSPRSRFHHFPGKY 82 >At1g65800.1 68414.m07467 S-receptor protein kinase, putative similar to PIR|T05180|T05180 S-receptor kinase ARK3 precursor - [Arabidopsis thaliana] Length = 847 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 195 LLEVQE*CTKGRSCYPFGNLDFPNATAMC 281 L E +E C KG +C F N D N + C Sbjct: 373 LKECEERCLKGCNCTAFANTDIRNGGSGC 401 >At1g35860.1 68414.m04455 chloroplast outer membrane protein-related similar to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607 Length = 399 Score = 27.5 bits (58), Expect = 8.7 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +2 Query: 86 QATHSQSIPSR--RVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSRF 259 Q T +S+ R ++ DP P + SS P GTI P + RS + S+ S F Sbjct: 142 QETDQKSVEGSADRSIVPDPGGYPSLASSQPSGTISFEHPNIKGL--NRSLIGSIATSNF 199 Query: 260 PKRHRNVHFPQPY 298 ++ F Y Sbjct: 200 LNPEDDLSFKLEY 212 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,803,224 Number of Sequences: 28952 Number of extensions: 299502 Number of successful extensions: 851 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 850 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1438152744 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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