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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0782
         (744 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0674 - 21745321-21746223,21746229-21747608                       37   0.015
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316...    30   2.2  
02_05_1018 - 33530834-33530926,33531036-33531098,33531193-335312...    29   3.9  
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773...    29   5.2  
02_05_0609 - 30335054-30335374,30335491-30335870,30336102-303364...    29   5.2  
03_02_0193 + 6312518-6312554,6312948-6313091,6313214-6313368,631...    28   6.8  
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739...    28   9.0  
04_04_0626 - 26686411-26686518,26686876-26686953,26687763-266878...    28   9.0  

>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 31/101 (30%), Positives = 42/101 (41%)
 Frame = -2

Query: 383 SETSSRIWKPISGKIPSVRRSNPALTTLTMTPGFDKSILDWISLRRTASSPRSKCKSSCT 204
           S  S+R     +GKIPS  R+NP  T  +  P   ++ L   S  +  S+P S C+ S  
Sbjct: 510 STASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTP-STCELSTA 568

Query: 203 PGS*PGIQPRSSCHRGSASRMSPLPSRCPRSKRCECT*S*P 81
            G  P     S     +  + S  PS  P S     T S P
Sbjct: 569 TGKIPSTTCTSPLST-ATGKTSSTPSTSPLSTSTSKTSSTP 608


>05_01_0400 -
           3159370-3159385,3159599-3159703,3159972-3160006,
           3160134-3160272,3160457-3160605,3161052-3161173,
           3161296-3161417,3161779-3162033,3162108-3162271,
           3162311-3162489,3162593-3162767,3162916-3163002,
           3163144-3163446,3163539-3163594,3163813-3163894,
           3163972-3164039,3164779-3164835,3164926-3164991,
           3165121-3165192,3167363-3167459
          Length = 782

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +1

Query: 235 EEAVRRNEIQSKIDLSKPGVIVNVVNAGFDLRTLGILPEIGFQMRDEVSDNRFPRFTLDL 414
           EEA+RRN++++ +   K GV     + G D+ T G +       R++    +    ++D+
Sbjct: 42  EEALRRNDVKAIVVTGKGGVF----SGGLDINTFGAI------QRNKAEQLKVDYVSIDV 91

Query: 415 HVNTKEK--KYHLNAYNTPEFG 474
             NT E   K  + A N P  G
Sbjct: 92  MTNTLEAAGKPSVAAINGPALG 113


>02_05_1018 -
           33530834-33530926,33531036-33531098,33531193-33531236,
           33531973-33532118,33532262-33532281,33532365-33532500,
           33532585-33532804,33532905-33533085,33533495-33533518,
           33534127-33534341,33534425-33534705,33535987-33536210
          Length = 548

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 568 IYGESLLVGYVTVVSRAITLTEDRKRLPKHSFRTQV 461
           IYG   ++GY+    +  TL++    LPKHSF ++V
Sbjct: 389 IYGSFAIIGYLMFGDK--TLSQITLNLPKHSFASKV 422


>08_02_1237 +
           25475219-25475916,25476127-25476320,25476407-25477302,
           25477416-25477490,25477582-25477689,25477780-25477897,
           25478007-25478142,25478228-25478372,25478460-25479080,
           25479166-25479597
          Length = 1140

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 168 GATRLNPGSRTWSTRTLTFTA 230
           GATRL+   RTW+T  LTF +
Sbjct: 697 GATRLSKSWRTWNTPELTFVS 717


>02_05_0609 -
           30335054-30335374,30335491-30335870,30336102-30336443,
           30336551-30336700,30336781-30336878,30336986-30337045,
           30337140-30337211,30337337-30337480,30337584-30337655,
           30337767-30337899,30338076-30338181
          Length = 625

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 184 IPGHEPGVQELLHLLRGEEAVRRNEIQSKIDLSK 285
           +PGH P + E++ +L G+    R E   + D  K
Sbjct: 560 LPGHRPRMSEVVRMLEGDGLAERWEASQRADSHK 593


>03_02_0193 +
           6312518-6312554,6312948-6313091,6313214-6313368,
           6313596-6313871,6313957-6314081,6314234-6314351,
           6314663-6314740,6318972-6319059,6319241-6319297,
           6319398-6319405
          Length = 361

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +2

Query: 230 EEKKQCAAMRSNPRLICRNPESSSTWLTPDSIFVRLVSYLKLASKCVTRSP 382
           EE K C  + S  RLIC    S   WL  D        Y  L  K  T  P
Sbjct: 77  EESKVCTVLTS-ARLICSKYSSMDQWLGSDEYSPDATVYAHLLDKDETTVP 126


>07_03_1567 -
           27772815-27773302,27773471-27773561,27773641-27773988,
           27774929-27775110,27775191-27775368,27775453-27775605,
           27775993-27776232,27776369-27776449,27776485-27776730,
           27777151-27777240,27777536-27777778,27778365-27778529,
           27779017-27779080,27779162-27779286,27779383-27779476,
           27779647-27779714,27779798-27779989,27780618-27780752,
           27780847-27780934,27781014-27781107,27781484-27781547,
           27781657-27781708,27781911-27782014,27782099-27782158,
           27782687-27782770,27782892-27783125,27783442-27783864,
           27784675-27784736,27784867-27785521
          Length = 1700

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 122 NEKGVETFLKLSLGDRSYAAESRVTNLEYKNSYIYCEEKKQCAAMRSNP 268
           NEK  +     S+GDR     SR  NL  K    Y  +++Q    RS P
Sbjct: 19  NEKAEDEAAYESVGDRDVDLNSRQWNLNEKAEDAYHSDEEQYDGGRSGP 67


>04_04_0626 -
           26686411-26686518,26686876-26686953,26687763-26687810,
           26688012-26688167,26688725-26688795,26689949-26690055,
           26690145-26691112
          Length = 511

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 263 WISLRRTASSPRSKCKSSCTPGS*PGIQPRSSCHRGSASRMSPLPSRCPRSKRCECT 93
           W +  + AS+  +KC S  TPG+  G     S    S  R+    S     K+  C+
Sbjct: 312 WFAGLKFASTSSTKCYSDATPGTVWGCSQVPSSSTSSVDRIDEQLSDFETKKQISCS 368


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,753,315
Number of Sequences: 37544
Number of extensions: 414281
Number of successful extensions: 1117
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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