BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0782 (744 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080 SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 33 0.18 SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3 >SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1185 Score = 34.7 bits (76), Expect = 0.080 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = -2 Query: 494 TTPEA*FPN-SGVL*ALRWYFFSLVLT*RSKVNLGKRLSETSSRI----WKPISGKIPSV 330 + P+ FP+ S + W S T K GK +S +SS I KP++ + P+V Sbjct: 620 SAPDNFFPSRSSTITGSSWSSSSTTTTKHVKTVNGKVVSSSSSTISTSSGKPMTSEGPTV 679 Query: 329 RRSNPALTTLTMTPGFDKSILDWISLRRTASSPRSKCKSSCTPGS*PGIQPR 174 SNP +T+ +M ++ + +R +P + K++ TP P ++PR Sbjct: 680 TSSNPTVTSSSMMASSVEANPP-LPVRSPRPTPLPR-KTTSTPEKRPDVKPR 729 >SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) Length = 609 Score = 33.5 bits (73), Expect = 0.18 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +3 Query: 165 TGATRLNPGSRTWSTRTLTFTARRRSSAPQ*DPIQD 272 T + +N +RTWS R+ T + +R+SAP+ P+++ Sbjct: 546 TTSMTINMAARTWSRRSHTSSTAKRASAPEKTPVEE 581 >SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4527 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +3 Query: 528 TTVTYPTSSDSPYIFSGEACLDLDKKKQGHXTSVRYLINISNNRNQGSYCC 680 T +Y + ++ Y +GE C D+D+ G T +N N GSY C Sbjct: 741 TVGSYTCACNAGYTGNGETCADIDECSVGSHTCAPSGSTCTN--NVGSYVC 789 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,455,244 Number of Sequences: 59808 Number of extensions: 465421 Number of successful extensions: 1199 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1055 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1196 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2010148439 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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