Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0782
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily a...    28   6.1  
AF043703-2|AAK21501.2|   68|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 63 protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 392 KRLSETSSRIWKPISGKIPSVRRSNPALTTLTMTPGFDKS 273
           + +  +S+ I KP+  +IPS +    +L TL+ TPG  ++
Sbjct: 305 EEVENSSNLIRKPLKMEIPSPKIQKISLFTLSYTPGLPRN 344


>AF043703-2|AAK21501.2|   68|Caenorhabditis elegans Hypothetical
           protein W10C8.3 protein.
          Length = 68

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 290 ESSSTWLTPDSIFVRLVSYLKLASKCVTRSPTIAS 394
           ES+ +WL+P +  +R    +   S+CV+   TIA+
Sbjct: 2   ESADSWLSPRNFQIRQARKMDEFSRCVSLRATIAT 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,432,164
Number of Sequences: 27780
Number of extensions: 348928
Number of successful extensions: 978
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)