Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0782
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    29   0.061
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    29   0.061
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.3  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   7.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   7.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   7.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.0  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 77  KSANFKYIRTVLTEGN--EKGVETFLK 151
           KSAN+ Y+ TV +EG+  E G+E F +
Sbjct: 134 KSANWSYVSTVYSEGSYGEYGIEVFTR 160


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 77  KSANFKYIRTVLTEGN--EKGVETFLK 151
           KSAN+ Y+ TV +EG+  E G+E F +
Sbjct: 224 KSANWSYVSTVYSEGSYGEYGIEVFTR 250


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 312 VNHVDDDSGFRQINLGLDL 256
           + H+D+ SG   +++G+DL
Sbjct: 183 LRHMDEKSGSNVVDVGVDL 201


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 312 VNHVDDDSGFRQINLGLDL 256
           + H+D+ SG   +++G+DL
Sbjct: 183 LRHMDEKSGSNVVDVGVDL 201


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 257  SLRRTASSPRSKCKSSCTPGS*PGIQPRSS 168
            S  +  SSP S   S  T G  PGI P ++
Sbjct: 1477 SHNKIGSSPSSPVLSVRTQGQAPGIPPAAT 1506


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 257  SLRRTASSPRSKCKSSCTPGS*PGIQPRSS 168
            S  +  SSP S   S  T G  PGI P ++
Sbjct: 1473 SHNKIGSSPSSPVLSVRTQGQAPGIPPAAT 1502


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 147 KNVSTPFSLPSVKTVRMYLKLADFCS 70
           KNV T   LPS++  +M     DF S
Sbjct: 33  KNVDTVLVLPSIERDQMMAATFDFPS 58


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 147 KNVSTPFSLPSVKTVRMYLKLADFCS 70
           KNV T   LPS++  +M     DF S
Sbjct: 33  KNVDTVLVLPSIERDQMMAATFDFPS 58


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 147 KNVSTPFSLPSVKTVRMYLKLADFCS 70
           KNV T   LPS++  +M     DF S
Sbjct: 33  KNVDTVLVLPSIERDQMMAATFDFPS 58


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 335 SVRRSNPALTTLTMTPGFDKSILDW 261
           S R S+PA+ ++++  G   ++ +W
Sbjct: 550 SARDSSPAIESISVDSGSINTVAEW 574


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,481
Number of Sequences: 438
Number of extensions: 4962
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)