Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0781
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73910-1|CAA98134.2|  523|Caenorhabditis elegans Hypothetical pr...    35   0.066
M23078-1|AAA28125.1|  170|Caenorhabditis elegans protein ( C.ele...    35   0.066
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    32   0.47 
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    29   4.4  
Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    28   7.6  
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z35639-6|CAA84698.2|  322|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z73910-1|CAA98134.2|  523|Caenorhabditis elegans Hypothetical
           protein M117.1 protein.
          Length = 523

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 486 IPEKSELRFCRSISL*ILGIPKYSLRLVKLQPLFHQMFHAYLLSFHETT 632
           +PEKS+LR   +IS   L +P + L LV L P  H   H   ++F++ +
Sbjct: 372 LPEKSKLRLFNTIS---LQVPAFFLMLVVLLPREHPYLHVICITFYQAS 417


>M23078-1|AAA28125.1|  170|Caenorhabditis elegans protein (
           C.elegans dpy-20 to unc-22 region mRNA encoding a
           conserved ORF, clone pCesC5.).
          Length = 170

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 486 IPEKSELRFCRSISL*ILGIPKYSLRLVKLQPLFHQMFHAYLLSFHETT 632
           +PEKS+LR   +IS   L +P + L LV L P  H   H   ++F++ +
Sbjct: 19  LPEKSKLRLFNTIS---LQVPAFFLMLVVLLPREHPYLHVICITFYQAS 64


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 111 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKTSANSQNL 278
           + P ITP   N+   +  EQF+ ++ A N    N++        IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 111 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKTSANSQNL 278
           + P ITP   N+   +  EQF+ ++ A N    N++        IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
           protein F21G4.6 protein.
          Length = 1885

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 141 NNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKTSANSQNLKLQLNYPRTLNSHC 320
           N + F+  ++FL E    +G +  NR+GDD  E   +K  A  + +  QL    T +  C
Sbjct: 731 NTNNFETNDEFLIEALKCDGDKYFNRWGDD-MEVEKIKMGAMKEEILEQLEPLITQSLKC 789

Query: 321 F 323
           F
Sbjct: 790 F 790


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 577 CSFTSL-SEYLGIPRI*REILLQNLNSDFSGITSVHQCHRVTIV 449
           C FT+L SEY     +   ++L  L + F  + S+HQC R+ I+
Sbjct: 250 CGFTNLASEYNPKDLV---LMLNELFARFDKVASIHQCMRIKIL 290


>Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical
           protein F02D10.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 96  LFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASE 239
           +++R  +   TP  + N   + TEQ+ T D ++    L+ R+GD  SE
Sbjct: 89  IYERITQAYDTPGRQENGG-RYTEQYDTVDQSSKREHLSQRYGDHVSE 135


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 67  WLTFLKASSCCSIVQMSRSSHPRAKT---ILCFNSQN 168
           +L+FL  S+CCSI+     SH    T    LC NS N
Sbjct: 43  FLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTN 79


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 374 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVK 508
           + EN L+  +  C +   NL    FN C  +A        K+++K
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLK 491


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
            F52B5.3 protein.
          Length = 1425

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 379  WYIHENAKKFICHFLMFR*KQ*EFSVLG 296
            WY   + KK +CHFL  R K   F V G
Sbjct: 1157 WYNVRSVKKNLCHFLRLRHKFMHFFVKG 1184


>Z35639-6|CAA84698.2|  322|Caenorhabditis elegans Hypothetical
           protein D2045.7 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 254 DLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPE 382
           D  K+ +F  AT++P + + S    +H+E A EL  ++   PE
Sbjct: 159 DTIKMIDFGSATKMPIEIKTSADHHRHKEDAEELCSMMYRAPE 201


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 391 TRFAIDMRLCTSKPEPSVVQLLLL 462
           TRF I MR  TSK EP++ +LL L
Sbjct: 96  TRFIISMRDFTSKEEPTLSELLNL 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,182,056
Number of Sequences: 27780
Number of extensions: 333845
Number of successful extensions: 847
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)