Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0778
(691 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 27 0.42
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 25 1.7
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 25 1.7
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 25 3.0
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 25 3.0
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 24 5.2
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 24 5.2
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 5.2
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 6.9
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 9.1
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 27.5 bits (58), Expect = 0.42
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = -3
Query: 227 CKVFTRPPSISGALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETL 48
C+V PP+++ + T+ T A S +NC+ + RLF + + V
Sbjct: 286 CEVAVEPPAMTTTTTTTTTTPTTATACPSTTEFNYKELNCQ-NCGRLFISNNGRVSCCRC 344
Query: 47 RRASFPFDAMF 15
++S PF F
Sbjct: 345 MKSSTPFGKFF 355
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.4 bits (53), Expect = 1.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -3
Query: 164 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 12
TVR + RS VPP R+F+NE + E +F +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 208
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 25.4 bits (53), Expect = 1.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -3
Query: 164 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 12
TVR + RS VPP R+F+NE + E +F +AM C
Sbjct: 165 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 214
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -3
Query: 164 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 12
TVR + RS VPP R+F NE + E +F +AM C
Sbjct: 389 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 438
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -3
Query: 164 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 12
TVR + RS VPP R+F NE + E +F +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 208
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 23.8 bits (49), Expect = 5.2
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 84 KEPVGMWPAVDCQWRYRHGAS--ERRPHSSRCVGHHESTGDARRSGENFTSSGTCWDLSR 257
K+ +G+ + R H A RRP R + HH R + E+ +S W
Sbjct: 82 KQELGLQVSAKTVSRRLHAAGFCARRPRKVRKLQHHHVEARIRFAEEHLAASIFWWSKII 141
Query: 258 LSDSDQ 275
SD +
Sbjct: 142 FSDESR 147
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.8 bits (49), Expect = 5.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 549 GRSLILRX--MXSPYRTTSASNTRPGXPNXX*GTVWTHIQKPAQVFHDQ 689
GR L+L + SA+NT+ G P GTV + ++P + +++
Sbjct: 269 GRKLVLGIPLYGRNFTLASAANTQIGAPTVGGGTVGRYTREPGVMGYNE 317
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 5.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 164 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRA 39
T RPA+ A+ L CR R A+ + P +S R+A
Sbjct: 290 TGRPAYWCTPAIEELENECRIAEQRQLASPTDPDISALDRQA 331
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.4 bits (48), Expect = 6.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 116 LPVAVPPRRFGTPASQ-----FKMCRTSREHRRCSEV 211
L V +PP A+Q K CR +++ RCSE+
Sbjct: 163 LSVRLPPEDGAECATQPCSALLKACRYAKQPERCSEI 199
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 9.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 116 LPVAVPPRRFGTPASQ-----FKMCRTSREHRRCSEV 211
L V +PP A+Q K CR +++ RCSE+
Sbjct: 163 LSVRLPPEDGAGCATQPCSALLKACRYAKQPERCSEI 199
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,336
Number of Sequences: 2352
Number of extensions: 13603
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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