Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0777
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    28   0.069
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    28   0.069
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   6.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 417 LCHIAFRFDFVALFLPFKSILVFILQYEW 331
           LC++  R+  +AL + F  ILV + + EW
Sbjct: 134 LCYLLARYVALALVILFSEILVIVSEQEW 162


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 417 LCHIAFRFDFVALFLPFKSILVFILQYEW 331
           LC++  R+  +AL + F  ILV + + EW
Sbjct: 152 LCYLLARYVALALVILFSEILVIVSEQEW 180


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 452 LATRKLSPVQRASSPSRE---PKKLEFTINSKNPSPDSYSSTLIVDA 583
           L +RKL+     SS ++E   PK+  + +   +PSP S  S  + D+
Sbjct: 83  LKSRKLNNNNVVSSTNQEIRGPKRKTWKVEEDSPSPTSSVSPEVKDS 129


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 71  PVHQRARTRYHHHSYP*TC 15
           P+HQ + T YH  SY   C
Sbjct: 78  PMHQNSYTGYHLGSYAANC 96


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 430 QYPWTLRSRHTKTISSSKGKLPK 498
           +YPW    + T+  S  +  LP+
Sbjct: 114 EYPWMKEKKTTRKSSQQENGLPR 136


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  GDDISFELAGVREIKLIEKGEKKFNDNFILTVRL 136
           G D+S+ ++ V +I      +KK+   F+  ++L
Sbjct: 56  GTDLSYFISNVYQILAYNFWKKKYWSEFLANLKL 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,717
Number of Sequences: 336
Number of extensions: 3778
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)