Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0777
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607,690... 32 0.55
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 31 0.96
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333... 31 1.3
12_02_0722 - 22521909-22521932,22522291-22522419,22522976-225242... 29 3.9
12_02_0534 - 20103908-20105897,20106314-20107116 29 3.9
02_05_1352 - 35859019-35859109,35859307-35859350,35859402-358594... 29 3.9
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 3.9
12_02_0356 + 17915029-17916236,17932970-17933283,17933936-179342... 29 5.1
11_03_0064 + 9518810-9519164,9519533-9520359 29 5.1
10_07_0179 - 13860745-13861571,13861940-13862294 29 5.1
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 29 5.1
08_02_1451 - 27192418-27192423,27192424-27193146 29 5.1
04_03_0647 + 18367321-18367675,18368044-18368885 29 5.1
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 5.1
01_01_1127 + 8930593-8932681,8932812-8933401 28 6.8
11_04_0041 - 12690287-12690816,12691087-12691378 28 9.0
07_01_0203 + 1469575-1470045 28 9.0
07_01_0199 - 1420982-1421452 28 9.0
07_01_0195 - 1387831-1388301 28 9.0
07_01_0191 - 1354678-1355148 28 9.0
07_01_0187 - 1321525-1321995 28 9.0
>04_01_0526 -
6901003-6901056,6901070-6901404,6901423-6901607,
6902201-6904641
Length = 1004
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 443 HCVLATRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSSTLIVDADGRVYK 601
+C +AT+K P+ +ASS S+ P K FT + + L A G VYK
Sbjct: 488 YCRIATKKNIPLSQASSKSQLPLK-TFTYKELEKATAGFHEILGAGASGVVYK 539
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +2
Query: 425 RYNILGHCVLATRKLSPVQRASSPS--REPKKLEFTINSKNPSPDSYSSTLIVDADGRVY 598
R+ ++G C TRKL V ++S S EP +L + S N S S LI+ G
Sbjct: 32 RFVLVGRCCSGTRKLGLVCASNSHSSVMEPAQLPLSPESGNTPKKSSESALILIRHGESL 91
Query: 599 KLENNVVLSKGPSSIGPQILQSKLEQTK 682
E N+ + P+ + +E K
Sbjct: 92 WNEKNLFTGCVDVPLTPKGVDEAIEAGK 119
>12_02_0723 -
22532379-22532902,22533060-22533135,22533195-22533380,
22533459-22534323,22534740-22534918,22535168-22535542
Length = 734
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 295 TGTIKFLVPHVDPFIL-EYKYKNGLEGEKKSHEVEAKG-NMAKAKALQYP 438
TG + L+P + ++ EYK + G++GE + E E KG N A K + P
Sbjct: 5 TGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMNAALHKVAETP 54
>12_02_0722 -
22521909-22521932,22522291-22522419,22522976-22524242,
22524659-22525461
Length = 740
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 295 TGTIKFLVPHVDPFIL-EYKYKNGLEGEKKSHEVEAKGNMA 414
TG + L+P + ++ EYK + G++GE + E E KG A
Sbjct: 5 TGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTA 45
>12_02_0534 - 20103908-20105897,20106314-20107116
Length = 930
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 295 TGTIKFLVPHVDPFIL-EYKYKNGLEGEKKSHEVEAKGNMA 414
TG + L+P + ++ EYK + G++GE + E E KG A
Sbjct: 5 TGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTA 45
>02_05_1352 -
35859019-35859109,35859307-35859350,35859402-35859494,
35859640-35859858,35860990-35861121,35861265-35861345,
35861637-35861726,35863290-35863416,35864604-35864665
Length = 312
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 349 KYKNGLEGE--KKSHEVEAKGNMAKAKALQYPWTLRSRHTKTISSSKGK 489
KY LE E + SH+V K + + L+Y TL ++ K ++SS G+
Sbjct: 197 KYIELLEAEIDELSHQVARKSSQGSNELLEYLKTLEPQNLKELASSAGE 245
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 458 TRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSSTLIVDADGRVYKLENNVVLSK-GP 634
TRKLS V+ S R+ K+ + K P+P S + V KLE K P
Sbjct: 506 TRKLSKVKTPSQQDRQQKEAKEDRQQKEPNPTGTPSKIAVS------KLEGETTQKKPNP 559
Query: 635 SSIGPQILQSKLE-QTK 682
+ ++ S+LE +TK
Sbjct: 560 TGTPSEMAVSRLEGETK 576
>12_02_0356 +
17915029-17916236,17932970-17933283,17933936-17934244,
17934613-17935439
Length = 885
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 554 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 590
>11_03_0064 + 9518810-9519164,9519533-9520359
Length = 393
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 62 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 98
>10_07_0179 - 13860745-13861571,13861940-13862294
Length = 393
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 62 KLAGPLYTKLRKNGQKYFNSEDIKLVRLIKEKVKELK 98
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 764 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 800
>08_02_1451 - 27192418-27192423,27192424-27193146
Length = 242
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 62 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 98
>04_03_0647 + 18367321-18367675,18368044-18368885
Length = 398
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 62 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 98
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 53 ELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDIK 163
+LAG KL + G+K FN I VRL EK ++K
Sbjct: 602 KLAGPLYAKLRKNGQKYFNSEDIKLVRLIKEKVKELK 638
>01_01_1127 + 8930593-8932681,8932812-8933401
Length = 892
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 719 SRTKRGALDENLSWSVRAWTGVFEVQYWMGP*IVLHCSPICRPFHQHL 576
SR R L E++ SVR W V E+ ++LH + C PFH L
Sbjct: 386 SRVLRKGL-EHIPDSVRLWKSVVELANEEDARLLLHRAVECCPFHLEL 432
>11_04_0041 - 12690287-12690816,12691087-12691378
Length = 273
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 420 KSATISLDTAFSPHENYLQFKGQAPQ--AENLRNWSSL*TPRIRLRTHTVARSS*ML-ME 590
K+ I+ F PH NY+Q G P + + SL IR+ T + R +L +
Sbjct: 64 KAKKITFPMVFVPHPNYIQVNGNRPNNLTSRICHGISLLGEVIRVSTRVINRGDVVLRLR 123
Query: 591 GS 596
GS
Sbjct: 124 GS 125
>07_01_0203 + 1469575-1470045
Length = 156
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 692 ENLSW--SVRAWTGVFEVQYWM 633
ENLSW SV+AWT V W+
Sbjct: 71 ENLSWNPSVQAWTAASSVDQWV 92
>07_01_0199 - 1420982-1421452
Length = 156
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 692 ENLSW--SVRAWTGVFEVQYWM 633
ENLSW SV+AWT V W+
Sbjct: 71 ENLSWNPSVQAWTAASSVDQWV 92
>07_01_0195 - 1387831-1388301
Length = 156
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 692 ENLSW--SVRAWTGVFEVQYWM 633
ENLSW SV+AWT V W+
Sbjct: 71 ENLSWNPSVQAWTAASSVDQWV 92
>07_01_0191 - 1354678-1355148
Length = 156
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 692 ENLSW--SVRAWTGVFEVQYWM 633
ENLSW SV+AWT V W+
Sbjct: 71 ENLSWNPSVQAWTAASSVDQWV 92
>07_01_0187 - 1321525-1321995
Length = 156
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 692 ENLSW--SVRAWTGVFEVQYWM 633
ENLSW SV+AWT V W+
Sbjct: 71 ENLSWNPSVQAWTAASSVDQWV 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,674,915
Number of Sequences: 37544
Number of extensions: 417380
Number of successful extensions: 1143
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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