BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0777 (740 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_25484| Best HMM Match : TENA_THI-4 (HMM E-Value=0.79) 29 3.0 SB_53710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 29 5.2 SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 28 6.9 SB_25086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1 SB_3606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1 SB_41941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1 >SB_25484| Best HMM Match : TENA_THI-4 (HMM E-Value=0.79) Length = 380 Score = 29.5 bits (63), Expect = 3.0 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Frame = -3 Query: 420 CLCHIAFRF---DFVALFLPFKSILVFILQYEWINMRD*ELDGSSSILKTFLAIHIDFDK 250 C HI RF DFV F F S + IL Y W RD D S + + F K Sbjct: 189 CRNHILKRFKTNDFVEAFRGFISPICIILSYAWHFERD-RYDWSFKMCSNLEKYNKKFSK 247 Query: 249 SALICTDSTSVY 214 + I ++ V+ Sbjct: 248 DSQIPPENAKVF 259 >SB_53710| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 355 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 320 LMLIHSYWSINTRMDLKGRKRATKS 394 L+LIH W +T DL +R TKS Sbjct: 17 LLLIHGAWGASTEDDLGSSRRVTKS 41 >SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 929 Score = 28.7 bits (61), Expect = 5.2 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = +2 Query: 344 SINTRMDLKGRKRATKSKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLEF 523 ++ + ++K +KR KS+R + Q R + +S Q SSPS P + Sbjct: 672 AVENQNEIKKKKRRKKSRRTSNTQPSDRRATSDSAFFESGTVSREQ--SSPSLAPSDSPY 729 Query: 524 TINSKNPSPDSYSS 565 + NS D YSS Sbjct: 730 SGNSSGEDWDIYSS 743 >SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) Length = 492 Score = 28.7 bits (61), Expect = 5.2 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 354 QEWT*RGEKEPRSRSERQYGKGKSATISLDTAFSPHENYLQFKG 485 QEW R +KE + + R GKG+ + +++ + + LQ KG Sbjct: 406 QEWRER-QKELQGKGGRHRGKGEGSAVNVQQEWRERQKELQGKG 448 >SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) Length = 1491 Score = 28.3 bits (60), Expect = 6.9 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +1 Query: 340 LEYKYKNGLEGEKKSHEVEAKGNMAKAKALQYP-WTLRSRHTKTISSSKGKLPKPR 504 LEY+Y+N L+ EKK +E + A+ +AL + L++R+ + + K + R Sbjct: 1224 LEYEYQNQLQREKKYYEDKIASLEAENEALMEDIFVLKTRYRQEKAMMKAEFETER 1279 >SB_25086| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 259 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +2 Query: 458 TRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSST 568 T +P+ +S P P+ + T + +PSPD +ST Sbjct: 125 TASTNPLASSSPPHSNPQTMPLTTAAISPSPDRSTST 161 >SB_3606| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 530 Score = 27.9 bits (59), Expect = 9.1 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +2 Query: 26 GNYGDDI--SFELAGVREIKLIEKGEKKFNDNFILTVRLPFEKAHDI 160 G+ DDI +F L+ + K E + KF+DNF+ + FE+A DI Sbjct: 35 GDKSDDILSTFNLSADDKRKY-EPVKTKFDDNFVKKRNVIFERARDI 80 >SB_41941| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 254 Score = 27.9 bits (59), Expect = 9.1 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -2 Query: 625 R*YYIVLQFVDPSISIYDERATV*VRRRILGVYSELQFLRFSAWGACP 482 R Y + L F P + YD ++ + R +LG+Y +F +G+ P Sbjct: 68 RDYELALSFRAPFDTYYDIYRSLSMSRLVLGIYLSERFYNSGKYGSLP 115 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,620,317 Number of Sequences: 59808 Number of extensions: 487976 Number of successful extensions: 1233 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1231 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1998111622 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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