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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0777
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68749-2|CAA92961.1|  260|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila...    29   4.6  
AF040643-2|AAB94961.1|  471|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U61288-1|AAB17543.1|  790|Caenorhabditis elegans CE protein.           28   6.0  
U13645-10|AAM15546.1|  418|Caenorhabditis elegans Hypothetical p...    28   6.0  
U13645-9|AAM15545.1|  597|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U13645-8|AAM15544.1|  565|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z75955-10|CAB00124.2|  410|Caenorhabditis elegans Hypothetical p...    28   8.0  
Z70753-3|CAA94768.1|  343|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U58739-2|AAB00608.1|  391|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z68749-2|CAA92961.1|  260|Caenorhabditis elegans Hypothetical
           protein F56H11.6 protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
 Frame = +2

Query: 341 WSINTRMDLKGRKRATKSKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLE 520
           W  NT+ D   +    K  +K +W+    +  +    L  +   P + A +   + K   
Sbjct: 154 WETNTKSDELSKVVKAKKGKKYVWENPGDFFKIDKWALLDKPKLPAKPAMNKKPKSKTRR 213

Query: 521 FTINSKNPSPDSYSSTLIVDADGRVYKLENNV-VLSKGPSSIGPQILQSKLEQTK 682
             +N K+P            ADG   +   NV  + K  S  GP ++ SK +  K
Sbjct: 214 QDLNKKSPHS---------GADGLSREDSINVDSMKKEKSGGGPSVMDSKKDSEK 259


>Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical
           protein C24H11.8b protein.
          Length = 676

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
 Frame = +2

Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613
           R ++ +RE ++ E     ++N K PS DS +S  + D DGR Y+ + +
Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470


>Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical
           protein C24H11.8a protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
 Frame = +2

Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613
           R ++ +RE ++ E     ++N K PS DS +S  + D DGR Y+ + +
Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470


>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
            roughdeal) homologprotein 1 protein.
          Length = 2049

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/82 (28%), Positives = 41/82 (50%)
 Frame = +2

Query: 392  SKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSSTL 571
            S  ++IW   KR ++L   +   ++     R   P     ++ +  +  N S DSY+S L
Sbjct: 1555 SNEESIWFT-KRESVL---MKDEKEFEKTGRMLDPFGHSLRVVYEDDGSNMS-DSYNSDL 1609

Query: 572  IVDADGRVYKLENNVVLSKGPS 637
             + +D  VY+  N+V++S  PS
Sbjct: 1610 ALSSDAMVYE-RNSVIISDLPS 1630


>AF040643-2|AAB94961.1|  471|Caenorhabditis elegans Hypothetical
           protein F14D2.7 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 216 YSAKSLPSGWRKNIVETHL 160
           Y ++ +PSGW K ++E H+
Sbjct: 44  YRSRQVPSGWAKTVLENHI 62


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
            R08B4.1b protein.
          Length = 1160

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 145  FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
            F W       +++EF   L+N K +LP  + L RDII+++
Sbjct: 1116 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1155


>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
            R08B4.1a protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 145  FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
            F W       +++EF   L+N K +LP  + L RDII+++
Sbjct: 1093 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1132


>U61288-1|AAB17543.1|  790|Caenorhabditis elegans CE protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
           F W       +++EF   L+N K +LP  + L RDII+++
Sbjct: 746 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 785


>U13645-10|AAM15546.1|  418|Caenorhabditis elegans Hypothetical
           protein C05D10.4c protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
           M+L   K AT+SK   +   +   +I         + TR    ++R+S   R+P  +   
Sbjct: 55  MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 114

Query: 518 -EFTINSKNPSPDSYSST 568
            E +I S +PSP S SST
Sbjct: 115 TEVSITSSSPSPSSSSST 132


>U13645-9|AAM15545.1|  597|Caenorhabditis elegans Hypothetical
           protein C05D10.4b protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
           M+L   K AT+SK   +   +   +I         + TR    ++R+S   R+P  +   
Sbjct: 234 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 293

Query: 518 -EFTINSKNPSPDSYSST 568
            E +I S +PSP S SST
Sbjct: 294 TEVSITSSSPSPSSSSST 311


>U13645-8|AAM15544.1|  565|Caenorhabditis elegans Hypothetical
           protein C05D10.4a protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
           M+L   K AT+SK   +   +   +I         + TR    ++R+S   R+P  +   
Sbjct: 202 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 261

Query: 518 -EFTINSKNPSPDSYSST 568
            E +I S +PSP S SST
Sbjct: 262 TEVSITSSSPSPSSSSST 279


>Z75955-10|CAB00124.2|  410|Caenorhabditis elegans Hypothetical
           protein R07B7.15 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 600 NWRTM*YYLRAHPVLDLKYSSPSSNRPRXIF 692
           +WRT+   L+AHP+L++      S +P  +F
Sbjct: 179 DWRTVTEILKAHPILEMSKIPNLSFQPNQLF 209


>Z70753-3|CAA94768.1|  343|Caenorhabditis elegans Hypothetical
           protein F40F9.4 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 98  KKFNDNFILTVRLPFEKAHDIKWVSTIFFLQPEGKDFAEYT 220
           KKF  ++ L + L F   + I W +T+ F     +D  EYT
Sbjct: 117 KKFTSDWKLGIILIFPVVYAIWWAATVRFCFWPNEDLREYT 157


>U58739-2|AAB00608.1|  391|Caenorhabditis elegans Hypothetical
           protein F28C10.4 protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 112 IIEFLLALFNKFDLPYTSELERDII 38
           II+FL   FNK    YTSE+ R II
Sbjct: 29  IIKFLCIYFNKLGNDYTSEIARLII 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,371
Number of Sequences: 27780
Number of extensions: 367684
Number of successful extensions: 1109
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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