BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0777 (740 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68749-2|CAA92961.1| 260|Caenorhabditis elegans Hypothetical pr... 30 2.0 Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 29 2.6 Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 29 2.6 U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila... 29 4.6 AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.6 Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 6.0 Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.0 U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 6.0 U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 28 6.0 U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 6.0 U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 6.0 Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical p... 28 8.0 Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.0 U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical pr... 28 8.0 >Z68749-2|CAA92961.1| 260|Caenorhabditis elegans Hypothetical protein F56H11.6 protein. Length = 260 Score = 29.9 bits (64), Expect = 2.0 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 1/115 (0%) Frame = +2 Query: 341 WSINTRMDLKGRKRATKSKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLE 520 W NT+ D + K +K +W+ + + L + P + A + + K Sbjct: 154 WETNTKSDELSKVVKAKKGKKYVWENPGDFFKIDKWALLDKPKLPAKPAMNKKPKSKTRR 213 Query: 521 FTINSKNPSPDSYSSTLIVDADGRVYKLENNV-VLSKGPSSIGPQILQSKLEQTK 682 +N K+P ADG + NV + K S GP ++ SK + K Sbjct: 214 QDLNKKSPHS---------GADGLSREDSINVDSMKKEKSGGGPSVMDSKKDSEK 259 >Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical protein C24H11.8b protein. Length = 676 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%) Frame = +2 Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613 R ++ +RE ++ E ++N K PS DS +S + D DGR Y+ + + Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470 >Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical protein C24H11.8a protein. Length = 653 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%) Frame = +2 Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613 R ++ +RE ++ E ++N K PS DS +S + D DGR Y+ + + Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470 >U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila roughdeal) homologprotein 1 protein. Length = 2049 Score = 28.7 bits (61), Expect = 4.6 Identities = 23/82 (28%), Positives = 41/82 (50%) Frame = +2 Query: 392 SKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSSTL 571 S ++IW KR ++L + ++ R P ++ + + N S DSY+S L Sbjct: 1555 SNEESIWFT-KRESVL---MKDEKEFEKTGRMLDPFGHSLRVVYEDDGSNMS-DSYNSDL 1609 Query: 572 IVDADGRVYKLENNVVLSKGPS 637 + +D VY+ N+V++S PS Sbjct: 1610 ALSSDAMVYE-RNSVIISDLPS 1630 >AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical protein F14D2.7 protein. Length = 471 Score = 28.7 bits (61), Expect = 4.6 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = -3 Query: 216 YSAKSLPSGWRKNIVETHL 160 Y ++ +PSGW K ++E H+ Sbjct: 44 YRSRQVPSGWAKTVLENHI 62 >Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein R08B4.1b protein. Length = 1160 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29 F W +++EF L+N K +LP + L RDII+++ Sbjct: 1116 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1155 >Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein R08B4.1a protein. Length = 1137 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29 F W +++EF L+N K +LP + L RDII+++ Sbjct: 1093 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1132 >U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. Length = 790 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29 F W +++EF L+N K +LP + L RDII+++ Sbjct: 746 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 785 >U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical protein C05D10.4c protein. Length = 418 Score = 28.3 bits (60), Expect = 6.0 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Frame = +2 Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517 M+L K AT+SK + + +I + TR ++R+S R+P + Sbjct: 55 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 114 Query: 518 -EFTINSKNPSPDSYSST 568 E +I S +PSP S SST Sbjct: 115 TEVSITSSSPSPSSSSST 132 >U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical protein C05D10.4b protein. Length = 597 Score = 28.3 bits (60), Expect = 6.0 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Frame = +2 Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517 M+L K AT+SK + + +I + TR ++R+S R+P + Sbjct: 234 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 293 Query: 518 -EFTINSKNPSPDSYSST 568 E +I S +PSP S SST Sbjct: 294 TEVSITSSSPSPSSSSST 311 >U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical protein C05D10.4a protein. Length = 565 Score = 28.3 bits (60), Expect = 6.0 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Frame = +2 Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517 M+L K AT+SK + + +I + TR ++R+S R+P + Sbjct: 202 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 261 Query: 518 -EFTINSKNPSPDSYSST 568 E +I S +PSP S SST Sbjct: 262 TEVSITSSSPSPSSSSST 279 >Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical protein R07B7.15 protein. Length = 410 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 600 NWRTM*YYLRAHPVLDLKYSSPSSNRPRXIF 692 +WRT+ L+AHP+L++ S +P +F Sbjct: 179 DWRTVTEILKAHPILEMSKIPNLSFQPNQLF 209 >Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical protein F40F9.4 protein. Length = 343 Score = 27.9 bits (59), Expect = 8.0 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 98 KKFNDNFILTVRLPFEKAHDIKWVSTIFFLQPEGKDFAEYT 220 KKF ++ L + L F + I W +T+ F +D EYT Sbjct: 117 KKFTSDWKLGIILIFPVVYAIWWAATVRFCFWPNEDLREYT 157 >U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical protein F28C10.4 protein. Length = 391 Score = 27.9 bits (59), Expect = 8.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 112 IIEFLLALFNKFDLPYTSELERDII 38 II+FL FNK YTSE+ R II Sbjct: 29 IIKFLCIYFNKLGNDYTSEIARLII 53 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,862,371 Number of Sequences: 27780 Number of extensions: 367684 Number of successful extensions: 1109 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 957 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1109 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1745954468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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