Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0777
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68749-2|CAA92961.1| 260|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 29 2.6
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila... 29 4.6
AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.0
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 6.0
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 28 6.0
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 6.0
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical p... 28 8.0
Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.0
U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z68749-2|CAA92961.1| 260|Caenorhabditis elegans Hypothetical
protein F56H11.6 protein.
Length = 260
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Frame = +2
Query: 341 WSINTRMDLKGRKRATKSKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLE 520
W NT+ D + K +K +W+ + + L + P + A + + K
Sbjct: 154 WETNTKSDELSKVVKAKKGKKYVWENPGDFFKIDKWALLDKPKLPAKPAMNKKPKSKTRR 213
Query: 521 FTINSKNPSPDSYSSTLIVDADGRVYKLENNV-VLSKGPSSIGPQILQSKLEQTK 682
+N K+P ADG + NV + K S GP ++ SK + K
Sbjct: 214 QDLNKKSPHS---------GADGLSREDSINVDSMKKEKSGGGPSVMDSKKDSEK 259
>Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical
protein C24H11.8b protein.
Length = 676
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613
R ++ +RE ++ E ++N K PS DS +S + D DGR Y+ + +
Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470
>Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical
protein C24H11.8a protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 482 RASSPSREPKKLEF----TINSKNPSPDSYSSTLIVDADGRVYKLENN 613
R ++ +RE ++ E ++N K PS DS +S + D DGR Y+ + +
Sbjct: 423 RRNNSARELREKEMMMMNSLNHKQPSMDSSTSRRLRDIDGRSYRSDRS 470
>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
roughdeal) homologprotein 1 protein.
Length = 2049
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +2
Query: 392 SKRKAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPKKLEFTINSKNPSPDSYSSTL 571
S ++IW KR ++L + ++ R P ++ + + N S DSY+S L
Sbjct: 1555 SNEESIWFT-KRESVL---MKDEKEFEKTGRMLDPFGHSLRVVYEDDGSNMS-DSYNSDL 1609
Query: 572 IVDADGRVYKLENNVVLSKGPS 637
+ +D VY+ N+V++S PS
Sbjct: 1610 ALSSDAMVYE-RNSVIISDLPS 1630
>AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical
protein F14D2.7 protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 216 YSAKSLPSGWRKNIVETHL 160
Y ++ +PSGW K ++E H+
Sbjct: 44 YRSRQVPSGWAKTVLENHI 62
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
F W +++EF L+N K +LP + L RDII+++
Sbjct: 1116 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1155
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
F W +++EF L+N K +LP + L RDII+++
Sbjct: 1093 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 1132
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 145 FEWQSYS*YEIIIEFLLALFN-KFDLPYTSELERDIITIV 29
F W +++EF L+N K +LP + L RDII+++
Sbjct: 746 FFWAYDKLRSVLVEFFGDLYNNKIELPTGTTLSRDIISLI 785
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
M+L K AT+SK + + +I + TR ++R+S R+P +
Sbjct: 55 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 114
Query: 518 -EFTINSKNPSPDSYSST 568
E +I S +PSP S SST
Sbjct: 115 TEVSITSSSPSPSSSSST 132
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
M+L K AT+SK + + +I + TR ++R+S R+P +
Sbjct: 234 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 293
Query: 518 -EFTINSKNPSPDSYSST 568
E +I S +PSP S SST
Sbjct: 294 TEVSITSSSPSPSSSSST 311
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 359 MDLKGRKRATKSKRKAIWQRQKRYNILGHCV----LATRKLSPVQRASSPSREPKKL--- 517
M+L K AT+SK + + +I + TR ++R+S R+P +
Sbjct: 202 MNLSDIKPATRSKSGEVLGPRNHIHIESITEFPRNIETRVPVKIERSSMVRRKPSNMGGS 261
Query: 518 -EFTINSKNPSPDSYSST 568
E +I S +PSP S SST
Sbjct: 262 TEVSITSSSPSPSSSSST 279
>Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical
protein R07B7.15 protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 600 NWRTM*YYLRAHPVLDLKYSSPSSNRPRXIF 692
+WRT+ L+AHP+L++ S +P +F
Sbjct: 179 DWRTVTEILKAHPILEMSKIPNLSFQPNQLF 209
>Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical
protein F40F9.4 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 98 KKFNDNFILTVRLPFEKAHDIKWVSTIFFLQPEGKDFAEYT 220
KKF ++ L + L F + I W +T+ F +D EYT
Sbjct: 117 KKFTSDWKLGIILIFPVVYAIWWAATVRFCFWPNEDLREYT 157
>U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical
protein F28C10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 112 IIEFLLALFNKFDLPYTSELERDII 38
II+FL FNK YTSE+ R II
Sbjct: 29 IIKFLCIYFNKLGNDYTSEIARLII 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,371
Number of Sequences: 27780
Number of extensions: 367684
Number of successful extensions: 1109
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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