Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0776
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.43 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.43 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   5.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   7.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 PCPRSYNVNQYF 284
           PCPR+YN   YF
Sbjct: 317 PCPRNYNPADYF 328


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 PCPRSYNVNQYF 284
           PCPR+YN   YF
Sbjct: 317 PCPRNYNPADYF 328


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 NQYFERAQKHDDQQITQQIQNSDDL 347
           ++Y+E    H D    + ++NSD +
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHI 560


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 NQYFERAQKHDDQQITQQIQNSDDL 347
           ++Y+E    H D    + ++NSD +
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHI 560


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 NQYFERAQKHDDQQITQQIQNSDDL 347
           ++Y+E    H D    + ++NSD +
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHI 560


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 NQYFERAQKHDDQQITQQIQNSDDL 347
           ++Y+E    H D    + ++NSD +
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHI 560


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 255 PRSYNVNQYFERAQKHDDQQITQQIQN 335
           P  Y +NQ +   +KH  QQ  Q  QN
Sbjct: 285 PNQYQMNQEYRTDRKH-TQQHYQMNQN 310


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 255 PRSYNVNQYFERAQKHDDQQITQQIQN 335
           P  Y +NQ +   +KH  QQ  Q  QN
Sbjct: 233 PNQYQMNQEYRTDRKH-TQQHYQMNQN 258


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 255 PRSYNVNQYFERAQKHDDQQITQQIQN 335
           P  Y +NQ +   +KH  QQ  Q  QN
Sbjct: 416 PNQYQMNQEYRTDRKH-TQQHYQMNQN 441


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49 YTNTKTDRFLVYYH 8
          Y    TDR++ YYH
Sbjct: 19 YRQFPTDRYVGYYH 32


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 391 NKLKINGTTSKIWVNKHK 444
           N  + +  T K W+N+HK
Sbjct: 90  NATRESTATLKAWLNEHK 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.129    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,940
Number of Sequences: 336
Number of extensions: 1738
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)