Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0776
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 35 0.034
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 32 0.18
04_01_0310 + 4197835-4197875,4197994-4198924 29 1.3
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 29 2.3
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040 29 2.3
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 29 2.3
07_03_0006 + 12268852-12269146,12269362-12269487,12269536-122697... 28 3.0
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 28 3.9
08_01_0217 + 1738321-1739104,1739683-1739915,1740002-1740292,174... 28 3.9
10_08_0406 - 17688069-17690643,17691065-17691132 27 5.2
05_01_0167 - 1153778-1153927,1154006-1154797,1155602-1156408,115... 27 5.2
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 27 6.9
03_06_0549 - 34664552-34664901,34665013-34665109 27 6.9
03_02_0310 + 7315185-7316820,7318332-7318879 27 6.9
09_04_0635 - 19143721-19145165,19145255-19145306 27 9.1
05_03_0416 + 13684604-13688050 27 9.1
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 34.7 bits (76), Expect = 0.034
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 255 PRSYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQ 434
P+ ++ Q ++ Q+ Q QQ Q QQ+ Q +KL+ QQ QNQ + Q
Sbjct: 47 PQHQHLQQQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQ 106
Query: 435 QT 440
QT
Sbjct: 107 QT 108
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 309 QQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
+Q QQ+++ LQQ+ QF++ + + QQ Q Q ++ QQ Q
Sbjct: 500 RQQLQQLRHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQ 544
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQ 401
Q F++ Q+ QQ QQ Q QQ+ QF++ QQ+Q
Sbjct: 517 QQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQQHQQQQQSQ 558
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 297 KHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
+ QQ QQ Q QQ+ QF+ + QQ Q + QQ Q
Sbjct: 513 QQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQQHQQQQQSQQLQ 561
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 310 NKLHNRFRTLMIYSKKIINSKNWKTSVNKLKINGTTSKIWVNKHK 444
N L R + L + K+ N K W V KI+ ++W H+
Sbjct: 37 NDLERRVKRLEYENNKLSNEKRWAVDVYSRKISTLEYRVWELDHQ 81
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQ 434
Q ++ Q+ QQ QQIQ QQ+ Q ++ + + QQ Q L+ Q
Sbjct: 1134 QQLQQLQQQQQQQQQQQIQQQQ--QQQQQQQQQQQQIQQQQQQMGSPLQQAAQ 1184
>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
Length = 339
Score = 28.7 bits (61), Expect = 2.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 328 ICCVICWSSCF 296
ICCV+CW CF
Sbjct: 20 ICCVLCWCCCF 30
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 214 INCQICDEHGYVRVHGHITLISIS 285
+NC + D H Y HG++ ++SIS
Sbjct: 75 LNCDVDDNHVYRPFHGNVEVLSIS 98
>07_03_0006 +
12268852-12269146,12269362-12269487,12269536-12269753,
12269918-12270292,12270376-12270610,12270698-12270861
Length = 470
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 282 FERAQKHDDQQITQQIQN----SDDLQQENNQFEKLEDLGQQTQNQWDNL 419
F+ K+DD+ + ++ N +DD ++E + + D+G +++D L
Sbjct: 380 FKVGPKNDDEPVPMEMDNFDGPNDDTKKEGDDLDGKNDMGLTVSDEYDGL 429
>10_08_0259 + 16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 294 QKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNL 419
+ D I + N + L+ N+Q +K D+ + N W+NL
Sbjct: 1083 ESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENL 1125
>08_01_0217 +
1738321-1739104,1739683-1739915,1740002-1740292,
1740524-1740616,1740912-1741040,1741522-1741695,
1741883-1741990,1742073-1742279
Length = 672
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 199 QSLNAINCQICDEHGYVRVHGHITLISISNEHKNMTTNKLHNRFRTLMIYSKKIINSKNW 378
Q+L A++ CD+ +VRV + I ++N + + L+ R L + K + ++ W
Sbjct: 512 QNLAAVHIMKCDDDTFVRVDVVVRHIKLNNGGRPLYMGNLNLLHRPLRM-GKWTVTTEEW 570
Query: 379 KTSVNKLKING 411
+ NG
Sbjct: 571 PEDIYPPYANG 581
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 297 KHDDQQITQQIQNSDDLQQENNQFEKLED 383
+HDD +N DD QQ+ + EK ED
Sbjct: 686 EHDDHPPPAADENDDDQQQQKKKKEKKED 714
>05_01_0167 -
1153778-1153927,1154006-1154797,1155602-1156408,
1156514-1156618,1156985-1157059,1157160-1157233,
1157388-1157450,1157549-1157647,1157704-1157811,
1157908-1157973,1158073-1158150,1158257-1158304,
1158381-1158440,1158527-1158610,1158902-1158949,
1159049-1159096,1161462-1161579
Length = 940
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 226 ICDEHGYVRVHGHITLISISNEHKNMTTNKLHNR 327
I + H Y + ++ SI N H TT+K NR
Sbjct: 425 IIEAHNYFNFYAYMAGFSIVNVHSARTTSKKRNR 458
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 309 QQITQQIQNSDDLQQENNQFEKLEDLGQ 392
Q I+ +I + ++LQQ N+F+K + LGQ
Sbjct: 414 QGISFKIFSEEELQQATNKFDKQQVLGQ 441
>03_06_0549 - 34664552-34664901,34665013-34665109
Length = 148
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2
Query: 328 ICCVICWSSCFCARSKY*LTLYDRGHGRSHVHHRFDSLWHSVTDVGCACIF 176
+CC+ CW C C + DRG +L VT GC CI+
Sbjct: 32 LCCMTCW--CPCITFGRVAEIVDRGSTSCGASGALYALLAMVT--GCQCIY 78
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 243 LRPCPRSYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLED 383
L+P P+ ++ +F A K DD + ++ + E F+KL D
Sbjct: 601 LKPSPKPLSIEPHFSTASKEDDSSLETIVKCK---EAEAKLFQKLAD 644
>09_04_0635 - 19143721-19145165,19145255-19145306
Length = 498
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 244 SHVHHRFDSLWHSVTDVGCACIFVNL 167
+H + F+S W + G C F NL
Sbjct: 435 AHASYAFNSYWQQLRKTGATCYFNNL 460
>05_03_0416 + 13684604-13688050
Length = 1148
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 262 HITLISISNEHK--NMTTNKLHNRFRTLMIYSKKIINSKNWKTSVNKLK 402
++ +I++SN H + + RTL +Y+ KI W TS++ L+
Sbjct: 593 NLEIINLSNCHNFHGLPSTFACKALRTLNLYNTKITMLPQWVTSIDTLE 641
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.129 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,641,449
Number of Sequences: 37544
Number of extensions: 168763
Number of successful extensions: 607
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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