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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0776
         (446 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18062-1|AAB60347.1|  349|Homo sapiens TFIID subunit TAFII55 pro...    31   1.4  
M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antige...    31   1.4  
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige...    31   1.4  
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.             31   1.4  
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.                  31   2.4  
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  31   2.4  
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix...    31   2.4  
D42054-1|BAA07654.2|  475|Homo sapiens KIAA0092 protein.               30   4.1  
BX538201-1|CAD98066.1|  675|Homo sapiens hypothetical protein pr...    30   4.1  
BC039711-1|AAH39711.1|  270|Homo sapiens CEP57 protein protein.        30   4.1  
BC033781-1|AAH33781.1|  757|Homo sapiens PAXIP1 protein protein.       30   4.1  
BC029385-1|AAH29385.1|  450|Homo sapiens CEP57 protein protein.        30   4.1  
BC001233-1|AAH01233.1|  500|Homo sapiens centrosomal protein 57k...    30   4.1  
AY239292-1|AAP72184.1|  500|Homo sapiens proliferation-inducing ...    30   4.1  
AY225092-1|AAO73938.1|  500|Homo sapiens translokin protein.           30   4.1  
AK123600-1|BAC85657.1| 1035|Homo sapiens  mRNA.  protein.              30   4.1  
AK123044-1|BAC85523.1|  548|Homo sapiens PTIP mRNA.  protein.          30   4.1  
BX255972-5|CAH73103.1|  402|Homo sapiens protein kinase C and ca...    29   5.5  
BX255972-4|CAH73102.1|  444|Homo sapiens protein kinase C and ca...    29   5.5  
BC128219-1|AAI28220.1|  306|Homo sapiens PACSIN1 protein protein.      29   5.5  
BC040228-1|AAH40228.1|  444|Homo sapiens PACSIN1 protein protein.      29   5.5  
AF242529-1|AAK29206.1|  444|Homo sapiens protein kinase C and ca...    29   5.5  
AB037800-1|BAA92617.2|  457|Homo sapiens KIAA1379 protein protein.     29   5.5  
X97999-1|CAA66636.1|  349|Homo sapiens transcription factor IID ...    29   7.2  
U80742-1|AAB91440.1|  652|Homo sapiens CAGH45 protein.                 29   7.2  
U80736-1|AAB91435.1|  331|Homo sapiens CAGF9 protein.                  29   7.2  
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.               29   7.2  
BC032737-1|AAH32737.1|  349|Homo sapiens TAF7 RNA polymerase II,...    29   7.2  
AF349038-1|AAK30585.1|  349|Homo sapiens TFIID subunit TAFII55 p...    29   7.2  
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ...    29   7.2  
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto...    29   7.2  
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ...    29   7.2  
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.               29   7.2  
U64822-1|AAB63354.1|  373|Homo sapiens josephin MJD1 protein.          29   9.5  
AB209309-1|BAD92546.1|  155|Homo sapiens ataxin 3 isoform 1 vari...    29   9.5  

>U18062-1|AAB60347.1|  349|Homo sapiens TFIID subunit TAFII55
           protein.
          Length = 349

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
           ++Q+  ++  SD+  QEN   E    L    QNQ DN++   Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQNQIDNMKGKLQETQD 297


>M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antigen
            protein.
          Length = 2095

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 243  LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
            L+ C R S ++ + FE++ +   Q I  + +N+D +Q+ N + EK  +  +  + + + L
Sbjct: 966  LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1025

Query: 420  ENLGQQTQ 443
                 +T+
Sbjct: 1026 TRQNNETK 1033


>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
            protein.
          Length = 2649

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 243  LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
            L+ C R S ++ + FE++ +   Q I  + +N+D +Q+ N + EK  +  +  + + + L
Sbjct: 1520 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1579

Query: 420  ENLGQQTQ 443
                 +T+
Sbjct: 1580 TRQNNETK 1587


>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
          Length = 2649

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 243  LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
            L+ C R S ++ + FE++ +   Q I  + +N+D +Q+ N + EK  +  +  + + + L
Sbjct: 1520 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1579

Query: 420  ENLGQQTQ 443
                 +T+
Sbjct: 1580 TRQNNETK 1587


>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
          Length = 4957

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
            Q  ++ Q+   QQ+ QQ Q     QQ+  Q  ++ + L QQ Q Q    +   QQ Q
Sbjct: 3338 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 3394



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 267  NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
            ++ Q  ++ Q    QQ+ QQ Q     QQ+  Q ++L+   QQ Q Q    + L QQ Q
Sbjct: 3316 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 3373


>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
            Q  ++ Q+   QQ+ QQ Q     QQ+  Q  ++ + L QQ Q Q    +   QQ Q
Sbjct: 3643 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 3699



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 267  NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
            ++ Q  ++ Q    QQ+ QQ Q     QQ+  Q ++L+   QQ Q Q    + L QQ Q
Sbjct: 3621 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 3678


>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
            mixed-lineage leukemia 2 variant protein.
          Length = 2704

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
            Q  ++ Q+   QQ+ QQ Q     QQ+  Q  ++ + L QQ Q Q    +   QQ Q
Sbjct: 1085 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 1141



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 267  NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
            ++ Q  ++ Q    QQ+ QQ Q     QQ+  Q ++L+   QQ Q Q    + L QQ Q
Sbjct: 1063 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 1120


>D42054-1|BAA07654.2|  475|Homo sapiens KIAA0092 protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 173 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 213


>BX538201-1|CAD98066.1|  675|Homo sapiens hypothetical protein
           protein.
          Length = 675

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
           L+P  + + + Q F + Q+H   QQ   Q+Q    L    QQ+  Q ++L+ + QQ Q Q
Sbjct: 94  LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 153


>BC039711-1|AAH39711.1|  270|Homo sapiens CEP57 protein protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212


>BC033781-1|AAH33781.1|  757|Homo sapiens PAXIP1 protein protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
           L+P  + + + Q F + Q+H   QQ   Q+Q    L    QQ+  Q ++L+ + QQ Q Q
Sbjct: 176 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 235


>BC029385-1|AAH29385.1|  450|Homo sapiens CEP57 protein protein.
          Length = 450

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212


>BC001233-1|AAH01233.1|  500|Homo sapiens centrosomal protein 57kDa
           protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212


>AY239292-1|AAP72184.1|  500|Homo sapiens proliferation-inducing
           protein 8 protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212


>AY225092-1|AAO73938.1|  500|Homo sapiens translokin protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
           ER ++HD   +  Q++  D L+QE N+   ++ L ++   +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212


>AK123600-1|BAC85657.1| 1035|Homo sapiens  mRNA.  protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
           L+P  + + + Q F + Q+H   QQ   Q+Q    L    QQ+  Q ++L+ + QQ Q Q
Sbjct: 454 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 513


>AK123044-1|BAC85523.1|  548|Homo sapiens PTIP mRNA.  protein.
          Length = 548

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
           L+P  + + + Q F + Q+H   QQ   Q+Q    L    QQ+  Q ++L+ + QQ Q Q
Sbjct: 397 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 456


>BX255972-5|CAH73103.1|  402|Homo sapiens protein kinase C and
           casein kinase substrate in neurons 1 protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 159 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 193


>BX255972-4|CAH73102.1|  444|Homo sapiens protein kinase C and
           casein kinase substrate in neurons 1 protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235


>BC128219-1|AAI28220.1|  306|Homo sapiens PACSIN1 protein protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 85  DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 119


>BC040228-1|AAH40228.1|  444|Homo sapiens PACSIN1 protein protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235


>AF242529-1|AAK29206.1|  444|Homo sapiens protein kinase C and
           casein kinase substrate 1 protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235


>AB037800-1|BAA92617.2|  457|Homo sapiens KIAA1379 protein protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
           D+Q+   ++EK LED+G+ T    +N+E + +Q Q
Sbjct: 214 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 248


>X97999-1|CAA66636.1|  349|Homo sapiens transcription factor IID
           protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
           ++Q+  ++  SD+  QEN   E    L    Q Q DN++   Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297


>U80742-1|AAB91440.1|  652|Homo sapiens CAGH45 protein.
          Length = 652

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
           Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 545 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 598


>U80736-1|AAB91435.1|  331|Homo sapiens CAGF9 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 264 YNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQ 401
           +++ Q+ ++ Q+H  QQI QQ Q    LQQ   Q ++L+ +  Q+Q
Sbjct: 239 HHMQQHLQQQQQHLQQQINQQ-QLQQQLQQ-RLQLQQLQHMQHQSQ 282


>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
          Length = 2124

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
            Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 2017 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2070


>BC032737-1|AAH32737.1|  349|Homo sapiens TAF7 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 55kDa
           protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
           ++Q+  ++  SD+  QEN   E    L    Q Q DN++   Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297


>AF349038-1|AAK30585.1|  349|Homo sapiens TFIID subunit TAFII55
           protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
           ++Q+  ++  SD+  QEN   E    L    Q Q DN++   Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297


>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
            protein.
          Length = 2023

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
            Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 1916 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1969


>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
            receptor-associated protein complex component TRAP230
            protein.
          Length = 2212

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
            Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 2105 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2158


>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
            protein.
          Length = 2023

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
            Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 1916 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1969


>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
          Length = 2027

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 276  QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
            Q  ++ Q H  QQ  QQI      QQ+  Q ++ +   QQ Q Q  + +   QQ
Sbjct: 1920 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1973


>U64822-1|AAB63354.1|  373|Homo sapiens josephin MJD1 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 279 YFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQN 404
           YFE+ Q+   QQ  QQ Q     QQ+  Q ++  DL  Q+ +
Sbjct: 287 YFEKQQQKQQQQ--QQQQQQQQQQQQQQQQQQQRDLSGQSSH 326


>AB209309-1|BAD92546.1|  155|Homo sapiens ataxin 3 isoform 1 variant
           protein.
          Length = 155

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 279 YFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQN 404
           YFE+ Q+   QQ  QQ Q     QQ+  Q ++  DL  Q+ +
Sbjct: 69  YFEKQQQKQQQQ--QQQQQQQQQQQQQQQQQQQRDLSGQSSH 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.129    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,891,022
Number of Sequences: 237096
Number of extensions: 908424
Number of successful extensions: 3022
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2980
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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