Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0776
(446 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55 pro... 31 1.4
M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antige... 31 1.4
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige... 31 1.4
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein. 31 1.4
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 2.4
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 2.4
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 2.4
D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein. 30 4.1
BX538201-1|CAD98066.1| 675|Homo sapiens hypothetical protein pr... 30 4.1
BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein. 30 4.1
BC033781-1|AAH33781.1| 757|Homo sapiens PAXIP1 protein protein. 30 4.1
BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein. 30 4.1
BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57k... 30 4.1
AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing ... 30 4.1
AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein. 30 4.1
AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein. 30 4.1
AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein. 30 4.1
BX255972-5|CAH73103.1| 402|Homo sapiens protein kinase C and ca... 29 5.5
BX255972-4|CAH73102.1| 444|Homo sapiens protein kinase C and ca... 29 5.5
BC128219-1|AAI28220.1| 306|Homo sapiens PACSIN1 protein protein. 29 5.5
BC040228-1|AAH40228.1| 444|Homo sapiens PACSIN1 protein protein. 29 5.5
AF242529-1|AAK29206.1| 444|Homo sapiens protein kinase C and ca... 29 5.5
AB037800-1|BAA92617.2| 457|Homo sapiens KIAA1379 protein protein. 29 5.5
X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID ... 29 7.2
U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein. 29 7.2
U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 29 7.2
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 29 7.2
BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,... 29 7.2
AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55 p... 29 7.2
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 29 7.2
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 29 7.2
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 29 7.2
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 29 7.2
U64822-1|AAB63354.1| 373|Homo sapiens josephin MJD1 protein. 29 9.5
AB209309-1|BAD92546.1| 155|Homo sapiens ataxin 3 isoform 1 vari... 29 9.5
>U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
++Q+ ++ SD+ QEN E L QNQ DN++ Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQNQIDNMKGKLQETQD 297
>M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2095
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
L+ C R S ++ + FE++ + Q I + +N+D +Q+ N + EK + + + + + L
Sbjct: 966 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1025
Query: 420 ENLGQQTQ 443
+T+
Sbjct: 1026 TRQNNETK 1033
>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2649
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
L+ C R S ++ + FE++ + Q I + +N+D +Q+ N + EK + + + + + L
Sbjct: 1520 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1579
Query: 420 ENLGQQTQ 443
+T+
Sbjct: 1580 TRQNNETK 1587
>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
Length = 2649
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 LRPCPR-SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
L+ C R S ++ + FE++ + Q I + +N+D +Q+ N + EK + + + + + L
Sbjct: 1520 LQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEEL 1579
Query: 420 ENLGQQTQ 443
+T+
Sbjct: 1580 TRQNNETK 1587
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
Q ++ Q+ QQ+ QQ Q QQ+ Q ++ + L QQ Q Q + QQ Q
Sbjct: 3338 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 3394
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 267 NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
++ Q ++ Q QQ+ QQ Q QQ+ Q ++L+ QQ Q Q + L QQ Q
Sbjct: 3316 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 3373
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
Q ++ Q+ QQ+ QQ Q QQ+ Q ++ + L QQ Q Q + QQ Q
Sbjct: 3643 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 3699
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 267 NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
++ Q ++ Q QQ+ QQ Q QQ+ Q ++L+ QQ Q Q + L QQ Q
Sbjct: 3621 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 3678
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQF-EKLEDLGQQTQNQWDNLENLGQQTQ 443
Q ++ Q+ QQ+ QQ Q QQ+ Q ++ + L QQ Q Q + QQ Q
Sbjct: 1085 QQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQ 1141
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 267 NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
++ Q ++ Q QQ+ QQ Q QQ+ Q ++L+ QQ Q Q + L QQ Q
Sbjct: 1063 SLQQLQQQQQLQQQQQLQQQ-QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQ 1120
>D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein.
Length = 475
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 173 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 213
>BX538201-1|CAD98066.1| 675|Homo sapiens hypothetical protein
protein.
Length = 675
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +3
Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
L+P + + + Q F + Q+H QQ Q+Q L QQ+ Q ++L+ + QQ Q Q
Sbjct: 94 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 153
>BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein.
Length = 270
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212
>BC033781-1|AAH33781.1| 757|Homo sapiens PAXIP1 protein protein.
Length = 757
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +3
Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
L+P + + + Q F + Q+H QQ Q+Q L QQ+ Q ++L+ + QQ Q Q
Sbjct: 176 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 235
>BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein.
Length = 450
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212
>BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57kDa
protein.
Length = 500
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212
>AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing
protein 8 protein.
Length = 500
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212
>AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein.
Length = 500
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
ER ++HD + Q++ D L+QE N+ ++ L ++ +
Sbjct: 172 ERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALAEKKMQE 212
>AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein.
Length = 1035
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +3
Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
L+P + + + Q F + Q+H QQ Q+Q L QQ+ Q ++L+ + QQ Q Q
Sbjct: 454 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 513
>AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein.
Length = 548
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +3
Query: 243 LRPCPRSYNVNQYFERAQKHD-DQQITQQIQNSDDL----QQENNQFEKLEDLGQQTQNQ 407
L+P + + + Q F + Q+H QQ Q+Q L QQ+ Q ++L+ + QQ Q Q
Sbjct: 397 LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQ 456
>BX255972-5|CAH73103.1| 402|Homo sapiens protein kinase C and
casein kinase substrate in neurons 1 protein.
Length = 402
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 159 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 193
>BX255972-4|CAH73102.1| 444|Homo sapiens protein kinase C and
casein kinase substrate in neurons 1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235
>BC128219-1|AAI28220.1| 306|Homo sapiens PACSIN1 protein protein.
Length = 306
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 85 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 119
>BC040228-1|AAH40228.1| 444|Homo sapiens PACSIN1 protein protein.
Length = 444
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235
>AF242529-1|AAK29206.1| 444|Homo sapiens protein kinase C and
casein kinase substrate 1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 201 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 235
>AB037800-1|BAA92617.2| 457|Homo sapiens KIAA1379 protein protein.
Length = 457
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 DLQQENNQFEK-LEDLGQQTQNQWDNLENLGQQTQ 443
D+Q+ ++EK LED+G+ T +N+E + +Q Q
Sbjct: 214 DVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQ 248
>X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID
protein.
Length = 349
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
++Q+ ++ SD+ QEN E L Q Q DN++ Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297
>U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein.
Length = 652
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 545 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 598
>U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein.
Length = 331
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 264 YNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQ 401
+++ Q+ ++ Q+H QQI QQ Q LQQ Q ++L+ + Q+Q
Sbjct: 239 HHMQQHLQQQQQHLQQQINQQ-QLQQQLQQ-RLQLQQLQHMQHQSQ 282
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 2017 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2070
>BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 55kDa
protein.
Length = 349
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
++Q+ ++ SD+ QEN E L Q Q DN++ Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297
>AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
++Q+ ++ SD+ QEN E L Q Q DN++ Q+TQD
Sbjct: 254 ERQLQDKLNESDEQHQEN---EGTNQLVMGIQKQIDNMKGKLQETQD 297
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 1916 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1969
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 2105 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2158
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 1916 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1969
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
Q ++ Q H QQ QQI QQ+ Q ++ + QQ Q Q + + QQ
Sbjct: 1920 QQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 1973
>U64822-1|AAB63354.1| 373|Homo sapiens josephin MJD1 protein.
Length = 373
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 279 YFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQN 404
YFE+ Q+ QQ QQ Q QQ+ Q ++ DL Q+ +
Sbjct: 287 YFEKQQQKQQQQ--QQQQQQQQQQQQQQQQQQQRDLSGQSSH 326
>AB209309-1|BAD92546.1| 155|Homo sapiens ataxin 3 isoform 1 variant
protein.
Length = 155
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 279 YFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQN 404
YFE+ Q+ QQ QQ Q QQ+ Q ++ DL Q+ +
Sbjct: 69 YFEKQQQKQQQQ--QQQQQQQQQQQQQQQQQQQRDLSGQSSH 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.129 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,891,022
Number of Sequences: 237096
Number of extensions: 908424
Number of successful extensions: 3022
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2980
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -