Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0776
(446 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 30 0.82
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 29 1.1
At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to ... 29 1.4
At5g22470.1 68418.m02621 poly (ADP-ribose) polymerase family pro... 29 1.9
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 29 1.9
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 29 1.9
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 28 2.5
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 28 2.5
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 28 2.5
At3g42590.1 68416.m04421 hypothetical protein similar to At2g161... 28 3.3
At1g55080.1 68414.m06291 expressed protein 28 3.3
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 28 3.3
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 27 4.4
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 27 4.4
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 4.4
At3g42740.1 68416.m04463 hypothetical protein similar to At3g243... 27 4.4
At1g77140.1 68414.m08986 vacuolar protein sorting protein 45, pu... 27 4.4
At1g11260.1 68414.m01289 glucose transporter (STP1) nearly ident... 27 4.4
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 27 5.8
At5g36850.1 68418.m04415 hypothetical protein similar to At1g277... 27 5.8
At3g61310.1 68416.m06861 DNA-binding family protein contains a A... 27 5.8
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 5.8
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 27 5.8
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 27 7.6
At3g03460.1 68416.m00344 hypothetical protein 27 7.6
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 27 7.6
At2g05562.1 68415.m00589 hypothetical protein 27 7.6
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 29.9 bits (64), Expect = 0.82
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +3
Query: 255 PRSYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQ 434
P Q Q+ QQI QQ Q LQQ+ Q +L+ QQ Q Q L Q
Sbjct: 679 PNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQ--QMPQLQQQQQQHQQQQQQQHQLSQ 736
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 294 QKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
Q+ QQ+ QQ Q +QQ+ Q + L+ Q Q Q ++ QQ Q
Sbjct: 682 QQQQQQQLHQQQQQQQQIQQQQQQQQHLQQ-QQMPQLQQQQQQHQQQQQQ 730
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 285 ERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQT 440
+RAQ+ QQ Q + QQ+ Q ++ + QQ QNQ + + Q T
Sbjct: 119 QRAQQQQQQQQQQHHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQST 170
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
Q ++ Q H QQ QQ Q QQ+ Q + + QQ Q Q
Sbjct: 125 QQQQQQQHHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQ 168
>At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to
embryonic flower 1 [Arabidopsis thaliana] GI:15430697
Length = 1096
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +3
Query: 288 RAQKHDDQQITQQIQNSDDLQQE------NNQFEK-LEDLGQQTQNQWDNLE 422
R+Q HD ++ T + QN+DD+ E NQ+E+ L D + N+ + E
Sbjct: 591 RSQSHDRKETTTEEQNNDDIPMEIVELMAKNQYERCLPDKEEDVSNKQPSQE 642
>At5g22470.1 68418.m02621 poly (ADP-ribose) polymerase family
protein similar to poly(ADP)-ribose polymerase [Zea
mays] GI:3928871; contains Pfam profiles PF00644:
Poly(ADP-ribose) polymerase catalytic domain, PF00533:
BRCA1 C Terminus (BRCT) domain, PF05406: WGR domain
Length = 815
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 267 NVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKL-EDLGQQTQNQWD 413
N+N YF+R + DD ++++ +D + +F +L E++ W+
Sbjct: 362 NLNMYFKRGKVGDDPNAEERLEEWEDEEAAIKEFARLFEEIAGNEFEPWE 411
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
+QQ QQ Q +QQ Q + L+ QQ Q Q+ GQQ Q
Sbjct: 631 EQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQ-----GQQLQ 671
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQ 443
+QQ QQ Q +QQ Q + L+ QQ Q Q+ GQQ Q
Sbjct: 389 EQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQ-----GQQLQ 429
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENN------QFEKLEDLGQQTQNQWDNLENLGQQ 437
Q + Q+ QQ+ QQ Q Q NN Q ++L QQ Q Q + + L QQ
Sbjct: 519 QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQHQQPLQQQ 578
Query: 438 TQ 443
TQ
Sbjct: 579 TQ 580
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENN------QFEKLEDLGQQTQNQWDNLENLGQQ 437
Q + Q+ QQ+ QQ Q Q NN Q ++L QQ Q Q + + L QQ
Sbjct: 518 QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQHQQPLQQQ 577
Query: 438 TQ 443
TQ
Sbjct: 578 TQ 579
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 276 QYFERAQKHDDQQITQQIQNSDDLQQENN------QFEKLEDLGQQTQNQWDNLENLGQQ 437
Q + Q+ QQ+ QQ Q Q NN Q ++L QQ Q Q + + L QQ
Sbjct: 519 QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQHQQPLQQQ 578
Query: 438 TQ 443
TQ
Sbjct: 579 TQ 580
>At3g42590.1 68416.m04421 hypothetical protein similar to At2g16170,
At2g06640, At2g12110, At2g12100, At2g05460
Length = 230
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA IF+ + ++ +F+QL RNH+ L
Sbjct: 126 IACAIIFICSRYDYMAGLFLQLYTRNHHPL 155
>At1g55080.1 68414.m06291 expressed protein
Length = 244
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 PRSYNVNQYFERAQKHDDQQITQQ----IQNSDDLQQENNQFEKLEDLGQQTQNQWDNLE 422
P +++ + ++ Q QQ QQ +Q QQ+ QF+ + Q Q+ +
Sbjct: 26 PTNHDQQLFLQQQQLQQQQQQQQQQQFHLQQQQQTQQQQQQFQPQQQQEMQQYQQFQQQQ 85
Query: 423 NLGQQTQ 443
+ QQ Q
Sbjct: 86 HFIQQQQ 92
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 282 FERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQ 437
F HD Q QQ Q QQ+ Q L+ QQTQ Q + QQ
Sbjct: 23 FGTPTNHDQQLFLQQQQLQQQQQQQQQQQFHLQQ-QQQTQQQQQQFQPQQQQ 73
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
finger (ZZ type) family protein contains Pfam profiles
PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 312 QITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQT 440
++ + + QQ N+F++ + QQ Q Q+ N L QQT
Sbjct: 399 RVNSSLSHQQQFQQPPNRFQQQPNQIQQQQQQFLNQRKLKQQT 441
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 426 NFRGCPIDFEFVDRGLPVFRIDYF 355
NF+ CP + ++ LPV+ + YF
Sbjct: 81 NFQNCPGHYGYLKLDLPVYNVGYF 104
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA +F+ ++ +F+QL RNHY L
Sbjct: 1168 LACAIVFIYAGYDYMGGLFLQLFTRNHYPL 1197
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
V CA +F+ ++ +F+QL RNHY L
Sbjct: 1219 VTCAIVFICAGYDYMGDLFLQLFTRNHYPL 1248
>At3g42740.1 68416.m04463 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 230
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -2
Query: 211 HSVTDVGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
++ T + CA +++ H+ ++++L NHY L
Sbjct: 121 NAATTLACAILYICAGNAHMGGVYLRLFGSNHYAL 155
>At1g77140.1 68414.m08986 vacuolar protein sorting protein 45,
putative / VPS45p, putative identical to vacuolar
protein sorting homolog VPS45p [Arabidopsis thaliana]
gi|2921406|gb|AAC39472
Length = 569
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 306 DQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNLENLGQQTQD 446
DQQ+ + + D ++N +E D+G + D+ + + + Q+
Sbjct: 267 DQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRMVDDFQQVAKSNQN 313
>At1g11260.1 68414.m01289 glucose transporter (STP1) nearly
identical to glucose transporter GB:P23586 SP|P23586
from [Arabidopsis thaliana]
Length = 522
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 273 NQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWDNL 419
N ER Q + + ++I+ DD+ QE + Q ++ W NL
Sbjct: 227 NSMIERGQHEEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNL 275
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/47 (23%), Positives = 28/47 (59%)
Frame = +3
Query: 261 SYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQ 401
+Y +++Y + A + + ++TQQ+ SDD + E ++ + Q+++
Sbjct: 428 TYQLDEYKKNALQ-ESSKVTQQLMKSDDGEDETEVVKETYETNQRSE 473
>At5g36850.1 68418.m04415 hypothetical protein similar to At1g27780,
At2g05560, At4g05280, At3g24385, At3g42590, At2g12110,
At2g12100
Length = 231
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA +F+ ++ +F+QL RNHY L
Sbjct: 127 LACAIVFICAGYDYMGGLFLQLFTRNHYPL 156
>At3g61310.1 68416.m06861 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 354
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 223 QICDEHGYVRVHGHITLISISNEHKNMTTNKLHNRFRTLMI 345
Q HG + G LIS+S + N T N NR +L +
Sbjct: 208 QPAPSHGTIIYEGLFELISLSTSYLNTTDNDYPNRTGSLAV 248
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA +F+ ++ +F+QL RNHY L
Sbjct: 1279 LACAIVFICAGYDYMGGLFLQLFTRNHYPL 1308
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA +F+ ++ +F+QL RNHY L
Sbjct: 1364 LACAIVFICAGYDYMGGLFLQLFTRNHYPL 1393
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3
Query: 240 WLRPCPRSYNVNQYFERAQKHDDQQITQQIQNSDDLQQENNQFEKLED 383
+++ P+S +V + E +K +++Q Q+ + ++ +E NQ E E+
Sbjct: 305 YIKEAPQSGSVQKKLEYQEKEEEEQ-EQEEEQPEEPAEEENQNENTEN 351
>At3g03460.1 68416.m00344 hypothetical protein
Length = 354
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 288 RAQKHDDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQ 407
+ Q+ QQ+ Q+Q +QQ Q ++ L +Q Q Q
Sbjct: 5 KQQQLQQQQLLLQMQQQQQMQQRQQQLFLMQHLQKQQQQQ 44
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 303 DDQQITQQIQNSDDLQQENNQFEKLEDLGQQTQNQWD 413
D Q+ +Q++ S++L E N+F+ G + NQ++
Sbjct: 460 DYSQLLKQLKQSEELLAEINRFKVATGQGMKNPNQFE 496
>At2g05562.1 68415.m00589 hypothetical protein
Length = 264
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 196 VGCACIFVNLKGLHLMSMFVQLLRRNHYLL 107
+ CA +F+ ++ +F+QL RNHY L
Sbjct: 160 LACAIVFICAWYDYMGGLFLQLFTRNHYPL 189
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.129 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,105,543
Number of Sequences: 28952
Number of extensions: 144839
Number of successful extensions: 589
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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