Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0775
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.0  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +2

Query: 404 AGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVP 583
           + P +E+  S +    T+      N + K+    +E     K +  +    P PSP  V 
Sbjct: 66  SAPEREHLASIIRLTPTQVKIWFQNHRYKTKRAQHE-----KGMHDQQNNNPLPSPRRVA 120

Query: 584 MPVL 595
           +PVL
Sbjct: 121 VPVL 124


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 608 TKGEPEPASAPSSAREP 558
           TK +P PA A  +A EP
Sbjct: 254 TKSKPRPAPASRNAPEP 270


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 611 QTKGEPEPASAPSSAREPVRSLS 543
           Q   +P P+ +P+   +PV +L+
Sbjct: 335 QISAQPTPSQSPNQIYQPVTNLT 357


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 539  QEIAIAPAPSPNSV 580
            +E+ + P P PN+V
Sbjct: 1035 REVTVVPKPDPNAV 1048


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 539  QEIAIAPAPSPNSV 580
            +E+ + P P PN+V
Sbjct: 1035 REVTVVPKPDPNAV 1048


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 579 TEFGEGAGAIAISCLI 532
           T FGE AGA A+  L+
Sbjct: 182 TIFGESAGAAAVHYLV 197


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 579 TEFGEGAGAIAISCLI 532
           T FGE AGA A+  L+
Sbjct: 184 TIFGESAGAAAVHYLV 199


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 579 TEFGEGAGAIAISCLI 532
           T FGE AGA A+  L+
Sbjct: 182 TIFGESAGAAAVHYLV 197


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 579 TEFGEGAGAIAISCLI 532
           T FGE AGA A+  L+
Sbjct: 184 TIFGESAGAAAVHYLV 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,398
Number of Sequences: 336
Number of extensions: 3487
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)