Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0775
(755 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0950 - 9428506-9428693,9429223-9429595,9430127-9430572,943... 33 0.19
05_05_0203 - 23229538-23229720,23229808-23230007,23230087-232307... 32 0.43
11_01_0452 - 3503827-3504010,3504366-3504559 31 0.75
02_05_0212 - 26808484-26809368 31 1.3
03_05_0310 + 23008915-23009841,23010401-23011162 30 2.3
06_03_1146 - 28004896-28005554,28005664-28005844 29 3.0
04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571 29 3.0
01_01_0051 + 389051-389623 29 3.0
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 29 5.3
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 28 7.0
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 28 7.0
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 28 7.0
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 28 7.0
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 28 9.2
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 28 9.2
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 28 9.2
>08_01_0950 -
9428506-9428693,9429223-9429595,9430127-9430572,
9430654-9430785,9431129-9431236,9431428-9431533
Length = 450
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -3
Query: 723 DXLXXAVEVRVPRNFIFGNVEVVXRKSICCGRSPLKGPDERGARTGIGTEF 571
D L +R GN +++ + CC R +G D+R +G G +
Sbjct: 83 DYLKKGFSIRRSSYHYMGNTKIIKNMTFCCSRQGSRGTDKRAEASGYGDSY 133
>05_05_0203 -
23229538-23229720,23229808-23230007,23230087-23230718,
23231493-23231844,23231926-23232136,23232413-23232472
Length = 545
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 672 GNVEVVXRKSICCGRSPLKGPDERGARTGIGTEFGE 565
GN +++ + CC R +G D+R +G G F +
Sbjct: 75 GNTKIIKNMTFCCSRQGSRGIDKRAEASGYGDSFSK 110
>11_01_0452 - 3503827-3504010,3504366-3504559
Length = 125
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 633 GRSPLKGPDERGARTGIGTEFGEGAGAIAISCLI 532
GR PL G ERG R G+G + G G + + L+
Sbjct: 57 GRRPLPGKGERGHRRGVGGD-GVGCAGVGVGILV 89
>02_05_0212 - 26808484-26809368
Length = 294
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 467 SHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPM---PVLAPLSSGPFSGLRPQ 637
S S+SK K ++ SPA +K K + A P SP VP+ P L L +G S +
Sbjct: 56 SSSSSKAKPAASSKVSPAKPRKPKAKAASVPPSSPPPVPLGPVPALTELPAG-HSSRQVV 114
Query: 638 QMLXRXTTSTLP 673
+++ + S LP
Sbjct: 115 EIIFLSSWSPLP 126
>03_05_0310 + 23008915-23009841,23010401-23011162
Length = 562
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 611 QTKGEPEPASAPSSAREPVRSLSPV*FSLTALE 513
+T+G EP SAP R RSLSP + T ++
Sbjct: 334 RTRGSAEPFSAPIGPRSAARSLSPCHVTRTKIQ 366
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 545 IAIAPAPSPNSVPM-PVLAPLSSGPFSGLRPQQMLXRXTTS 664
+A P+PSP+ PM P AP +S P S P M +T+
Sbjct: 181 VATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSPSTT 221
>04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571
Length = 740
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 410 PRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPMP 589
P + FN + + + + R+CS S + N ++P K+ + + P P P
Sbjct: 141 PISKVFN-RFHVHDSSRSCSKFLIASSS-DPNSQNPISGPKVSKVVDKPSDPIPKPTPSA 198
Query: 590 VLAPLSSGPFSGLRPQ 637
PL SGPF P+
Sbjct: 199 GPKPLGSGPFKRFSPR 214
>01_01_0051 + 389051-389623
Length = 190
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +2
Query: 380 SNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAP 559
S+S+E+ + + +S + +++ + S S+ + +P+P + K+E +P
Sbjct: 101 SSSSESSSSSSSSSSESSSSSSSSSSESSSSSSDDDLARRRQQRNPSPPPQYKKEARRSP 160
Query: 560 APSPNSVPMPVLAPLSSG 613
+PSP S + SSG
Sbjct: 161 SPSPPSSSSTSSSSSSSG 178
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 266 NSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACH 403
NS+DN P+ S + DAI+ + + S+ N SN+ CH
Sbjct: 1078 NSADNDAICPNVPDASDSNAANIDAIHPNVVDASSSNASNTDAVCH 1123
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 103 QKTQTRIVPKQKSTIITSKGQLIVGGRVSTTAHNIAPMPEIRPAP 237
+ T T P I +S G + RV+ TA P P + PAP
Sbjct: 142 EMTSTAAAPTPALIIGSSSGDGVSPSRVAVTAAAAEPTPALAPAP 186
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 28.3 bits (60), Expect = 7.0
Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Frame = +2
Query: 350 SAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHS--NSKIKS*ETNYESPAP 523
S +RT K G A+ P KE K T K + NS + SP
Sbjct: 577 SKVRTD-KGGRRPAKEASTRPLKETVGQKKAAITPKTGTAAEKRNSPVPQRARRNSSPPV 635
Query: 524 LKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPNMKFRGTLTS 703
L K E+ AP+ S P P AP++ +SG + T + P T TS
Sbjct: 636 LPK---ELT-PKAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAPTATS 691
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 515 PAPLKKIKQEIAI-APAPSPNSVPMPVLAPLSS 610
P+P+ ++K +I APAPSP P P +P S
Sbjct: 67 PSPIAQLKTLASIRAPAPSPKPSPSPSPSPRRS 99
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 503 NYESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSG 625
++ +PAP + A APA P+S PMP AP S+ P +G
Sbjct: 67 HHGAPAPHPGRRSPPAPAPANPPSSDPMPGGAP-SAAPAAG 106
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 644 AFAVVEAH*RAQTKGEPEPASAPSSAREPVRSLSP 540
AF VV+A + P P+ P + R P + SP
Sbjct: 32 AFLVVDARILTDARRRPPPSPTPPARRRPTKPASP 66
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 237 ETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQL---TAAQFEHLQK--TGQIVQKPA 401
++NS+ KK + + TE I Q++ +Q ++ +HL K TG+ ++K +
Sbjct: 1112 DSNSNRSVKKSSSS-NSQNTEGWISSQERDNEGIQKKTESSKPKDHLMKSHTGESLKKES 1170
Query: 402 TPAQEKKILIQKSITIPQNETA 467
P + +LI +S +PQ T+
Sbjct: 1171 LPTGSQDLLISESGNVPQINTS 1192
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 451 HKTKLQSLKFKNQELGNKLRVSSAVKEN*TGDSDRTGS 564
++ K+QSL+ +N++L ++L + +KE G D GS
Sbjct: 1225 YQRKIQSLEQENEDLTSQLEQMAHIKEEDLGKQDIGGS 1262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,652
Number of Sequences: 37544
Number of extensions: 386978
Number of successful extensions: 1874
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1848
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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