Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0775
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 32 0.58
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 32 0.58
SB_25852| Best HMM Match : Herpes_capsid (HMM E-Value=7) 32 0.58
SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_34351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23) 29 4.1
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_38664| Best HMM Match : HC2 (HMM E-Value=0.95) 28 7.1
SB_38662| Best HMM Match : HC2 (HMM E-Value=0.75) 28 7.1
SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23) 28 7.1
SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 28 7.1
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_15863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_15069| Best HMM Match : MbtH (HMM E-Value=2.3) 28 9.4
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 9.4
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 518 APLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFS 622
+P+ ++K+EI A PSPN+ P + +P S PFS
Sbjct: 475 SPVSRVKEEIPRALIPSPNTAPNMLTSPSSDTPFS 509
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/82 (24%), Positives = 42/82 (51%)
Frame = +2
Query: 260 KKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRKENFNSKV 439
+ N+++N+ N + T N +++ N++ + S ST+N +NS + N ++
Sbjct: 117 QSNNNNNSNNNNSTSNSNSSTRNNNNSTSNS--NNSTRNNNNSTSNSNNSTSNSNNSTSN 174
Query: 440 NYNTTKRNCSHSNSKIKS*ETN 505
+ N++ N S SNS + +N
Sbjct: 175 SNNSSNNNNSTSNSNNSTSNSN 196
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 350 SAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLK 529
S I + K + E+CH+G R +S+ T RN + +K + N+ P K
Sbjct: 855 SCISGTPKTSQHRTESCHSGSRGSKISSQKVIETGLRNTKTAGTKTSTVPHNHIKPTHYK 914
Query: 530 KIKQ 541
K+
Sbjct: 915 GTKE 918
>SB_25852| Best HMM Match : Herpes_capsid (HMM E-Value=7)
Length = 284
Score = 31.9 bits (69), Expect = 0.58
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 341 INRSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPA 520
I+R+ + T T++ S R+ + N K+N SH + IK Y++ +
Sbjct: 68 ISRTLV-TDTESDSGKLSETQEVARRLSRTRLGKENAVKQNSSHKTTPIKGPADPYDADS 126
Query: 521 PLKKIK--QEIAIAPAP-SPNSVPMPVLAPLSSGPFSGLRPQQMLXR 652
++ QE A P SP L ++ P S +RPQQML R
Sbjct: 127 EVESDPNMQETIQARVPMSPMVTDTHNLLNINI-PLSAIRPQQMLKR 172
>SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +2
Query: 239 NE*SHRTKKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRK 418
N + T+ NS NT ++ PN + N S T+ N + ++ P
Sbjct: 30 NSLHNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRYNSLPNTTRHNSPPNTTRHNSLPNT 89
Query: 419 ENFNSKVNYNTTKRNCSHSNSKIKS 493
NS +NTT+ NC H+ ++ S
Sbjct: 90 TRHNSL--HNTTRHNCLHNTTRHNS 112
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 239 NE*SHRTKKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRK 418
N ++ T+ NS +NT ++ PN + +N + S T+ N + ++ P
Sbjct: 3 NSPTNTTRHNSLNNTTRHNSLPNTTRHNSLHNTTRHNSLPNTTRHNSLPNTTRHNSLPNT 62
Query: 419 ENFNSKVNYNTTKRNCSHSNSKIKS 493
+NS NTT+ N + ++ S
Sbjct: 63 TRYNSLP--NTTRHNSPPNTTRHNS 85
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = +2
Query: 257 TKKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRKENFNSK 436
T+ NS+D+ N N K N+ N+S KN S + G + N NS
Sbjct: 134 TQDNSNDDDNNNSNNQNQQQQKDDNNNN-NKSNNNDDDKNNSKDDNNNNNGNKNSNNNSD 192
Query: 437 VNYNTTKRNCSHSNS 481
+YN K N NS
Sbjct: 193 SDYNNNKDNNDDENS 207
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/128 (25%), Positives = 47/128 (36%)
Frame = +2
Query: 299 TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSN 478
+PN K R A N + T T+ SA AG K +SK + + K + +
Sbjct: 677 SPNSETKKPRSTSAANTTTAPTQTRQKKTSAGKPAAG--KNPIDSKGSPTSEKSSRPATR 734
Query: 479 SKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSGLRPQQMLXRXT 658
+ + P + KQ APA SP S L P +P +L +
Sbjct: 735 GRPSTGRKPSAKSCPEQDKKQ----APAASPKSKSAVEAPELPPRPSVASKPTTLLSQNP 790
Query: 659 TSTLPNMK 682
TST K
Sbjct: 791 TSTTVKSK 798
>SB_34351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 234 PETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPAT 404
PET I K QTIH T I+ + S + +Q + +T Q + P T
Sbjct: 78 PETFQAIYTPKTSQTIHTPETSQAIYTPETSQAIYTPETSQAIYTPETSQTIHTPET 134
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +3
Query: 234 PETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPATPAQ 413
PET+ I + Q IH T I+ + S T+ +Q + +T Q + P T
Sbjct: 60 PETSQTIHTPETSQAIHTPETFQAIYTPKTSQTIHTPETSQAIYTPETSQAIYTPETSQA 119
Query: 414 EKKILIQKSITIPQNETAV 470
++I P+ A+
Sbjct: 120 IYTPETSQTIHTPETSQAI 138
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/87 (22%), Positives = 33/87 (37%)
Frame = +3
Query: 234 PETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPATPAQ 413
PET+ I + QTIH T I + + +Q H +T Q + P T
Sbjct: 51 PETSQAIYTPETSQTIHTPETSQAIHTPETFQAIYTPKTSQTIHTPETSQAIYTPETSQA 110
Query: 414 EKKILIQKSITIPQNETAVTQIQKSRA 494
++I P+ + + S+A
Sbjct: 111 IYTPETSQAIYTPETSQTIHTPETSQA 137
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 234 PETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPAT 404
PET+ I + Q IH T I+ + S T+ +Q + +T Q + P T
Sbjct: 123 PETSQTIHTPETSQAIHTPETFQAIYTPKTSQTIHTPETSQAIYTPETSQAIYTPET 179
>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +2
Query: 239 NE*SHRTKKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRK 418
N +H+ ++++N+ N + + + T + + N SN+ +
Sbjct: 195 NHNNHKNNNHNNNNSNNNNSNDHTATTTTPTAKTTPATVLVQQNINSSNNNNDQNNDHNN 254
Query: 419 ENFNSKVNYNTTKRNCSHSNS 481
N N+ NYN N SH+NS
Sbjct: 255 NNNNNNNNYNNHNINHSHNNS 275
>SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23)
Length = 734
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/91 (20%), Positives = 38/91 (41%)
Frame = +3
Query: 240 TNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPATPAQEK 419
TN + K+ T T L+ + + + + E LQ + +Q + +EK
Sbjct: 84 TNETEKEKEYAGTEESTVVSEQETLKSPTNAVRAVQEDEIERLQSVQRYMQSKISELEEK 143
Query: 420 KILIQKSITIPQNETAVTQIQKSRARKQITS 512
++ +P N + + + Q+S Q+TS
Sbjct: 144 LKILD---ALPTNRSIIEKAQQSELTNQLTS 171
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPNMKFR 688
+SP LKK K+E+AI P+P + +P + G + + P M + T + +P+ R
Sbjct: 153 DSPTGLKKKKREMAI-PSPMAMETSTAIPSPTTRGTSTAI-PTPMTWQ-TLAAIPSPMVR 209
Query: 689 GTLTS 703
T T+
Sbjct: 210 QTSTA 214
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 506 YESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGP 616
+ESP+P ++ + AP P PN P V L P
Sbjct: 610 HESPSPPSRVPPQPETAPKPFPNITPPEVRPSLPGTP 646
>SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 425 FNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPN 574
F +N ++R C +S S P P+++IKQE+ AP P+
Sbjct: 705 FEELLNEGDSRRTCQDKSSIANS------LPVPVQEIKQEVVTPTAPEPS 748
>SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 496 GNKLRVSSAVKEN*TGDSDRTGSLAELGADAGSGSPFVWALQWASTTANAF 648
GNK ++ S + DS+ +G L+ L A G GS L+ S AF
Sbjct: 331 GNKKKIMSMLANRGKTDSEESGRLSSLSA-TGRGSKLAGKLRAKSPAVQAF 380
>SB_38664| Best HMM Match : HC2 (HMM E-Value=0.95)
Length = 210
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 672 GNVEVVXRKSICCGRSPLKGPDERGARTGIGT 577
G V ++ I G++ ++ DE G RTG+GT
Sbjct: 73 GKTITVGKQKIHVGKTGIRDRDETGHRTGLGT 104
>SB_38662| Best HMM Match : HC2 (HMM E-Value=0.75)
Length = 280
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 672 GNVEVVXRKSICCGRSPLKGPDERGARTGIGT 577
G V ++ I G++ ++ DE G RTG+GT
Sbjct: 143 GKTITVGKQKIHVGKTGIRDRDETGHRTGLGT 174
>SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23)
Length = 684
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +2
Query: 347 RSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPL 526
RS I+T + N R + S+ + T +R H+ + E + L
Sbjct: 160 RSEIKTVAEETHNDLVGNLTEKRSLDSPSEADTETKRRRLEHAFLSKNNKENELDI---L 216
Query: 527 KKIKQEIAIAPAPSPNSVPM 586
+ ++++I+ +P+PSP+ +PM
Sbjct: 217 QALQEKISPSPSPSPDILPM 236
>SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1513
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 DAINRSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHS-NSKIKS*ETNYE 511
D R+ T ++N + A A AGP + ++V+ N K SHS +S I++ YE
Sbjct: 34 DFTTRTTSNTRSRNPAAGAPAYVAGPVDGSLYAQVDKNLKKHIRSHSLDSGIQTAADPYE 93
Query: 512 SPAPLKKIKQEIAI 553
A K A+
Sbjct: 94 RRAQTLNYKSRNAV 107
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 551 IAPAPSPNSV-PMPVLAPLSSGPFSGLRPQQMLXRXTTS 664
+ P PSP + PMP L+PLSS S R ++ + TS
Sbjct: 813 LRPVPSPRTPSPMPSLSPLSSTDSSTPRSRRTIDLPPTS 851
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 332 NDAINRSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS 493
N +IN R +++ N+ E C +N S + YNTT N S +KIK+
Sbjct: 1015 NSSINSKGRRGTSRKADNT-EKCSDEGVDDNGGS-MGYNTTNPNDSSKKTKIKN 1066
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +3
Query: 237 ETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPATPAQE 416
+ NS + K++ + K + + LQQK+ MMQ Q + Q+ Q+P +
Sbjct: 35 DKNSELREKEL--NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQLQ 92
Query: 417 KKILIQKSI---TIPQNETAVTQIQKSRARKQ 503
++ L Q+ + + Q + Q+Q+ + ++Q
Sbjct: 93 QQQLQQQQLQQQQLQQQQQQQQQLQQQQPQQQ 124
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +3
Query: 237 ETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPATPAQE 416
+ NS + K++ + K + + LQQK+ MMQ Q + Q+ Q+P +
Sbjct: 34 DKNSELREKEL--NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQLQ 91
Query: 417 KKILIQKSI---TIPQNETAVTQIQKSRARKQ 503
++ L Q+ + + Q + Q+Q+ + ++Q
Sbjct: 92 QQQLQQQQLQQQQLQQQQQQQQQLQQQQPQQQ 123
>SB_15863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/77 (24%), Positives = 28/77 (36%)
Frame = +3
Query: 177 GSSFYYCTQYSSHA*NTTCPETNSHIEPKKIVQTIHKTTTEPLIFLQQKSGTMMQLTAAQ 356
G + T Y S + H K+++ + K I Q KS Q T+ +
Sbjct: 695 GKDYLIVTDYYSRYIKIAHTTKSPHTTSKRVIGKLKKMFARWGIPEQVKSDGGPQFTSKE 754
Query: 357 FEHLQKTGQIVQKPATP 407
FE K P+TP
Sbjct: 755 FEEFSKEYGFTHDPSTP 771
>SB_15069| Best HMM Match : MbtH (HMM E-Value=2.3)
Length = 270
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -3
Query: 267 FFLVRCDYSFRGRSYFRHGSYIVCSSRNSTPNDE 166
F +RC+ F+ R+ S++VC+ R+S P ++
Sbjct: 129 FTALRCNGIFKHRNPASSPSFLVCNVRSSAPKED 162
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 705 VEVRVPRNFIFGNVEVVXRKSICCGRSPLKGPDERGARTGIGTEFGEGA 559
+E + + GN+ +V R SICC + P + + + TE GE A
Sbjct: 754 IETNRKKALLTGNIYIVSRSSICCKTCKVHNPLKNSGKNAV-TE-GEEA 800
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGP 616
E+P P + Q +A P P P + P AP P
Sbjct: 94 EAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPP 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,612,549
Number of Sequences: 59808
Number of extensions: 419387
Number of successful extensions: 1577
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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