Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0775
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/65 (20%), Positives = 32/65 (49%)
 Frame = +1

Query: 559  GSLAELGADAGSGSPFVWALQWASTTANAFXANHFNVTEYEISRDSYFYGXAKXVESVVS 738
            G+  ++G +   G+     L++ S  ++   AN ++  EY+   D Y Y  ++  ++ + 
Sbjct: 1298 GTDNDMGEEGRRGASSPSFLRYDSDCSSNSSANFYSSDEYDEEDDYYLYDGSEKPKNAIE 1357

Query: 739  QPEQA 753
              ++A
Sbjct: 1358 PSQEA 1362


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +2

Query: 563 PSPNSVP-MPVLAPLSSGPFSGLRPQQMLXRXTTSTLPNM 679
           P P  +P MP   PL  GP   L P  M  R     +P M
Sbjct: 87  PRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTM 126


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 355 CAAVNCIIVPDFCCR 311
           C+ + C++V  FCCR
Sbjct: 175 CSTLLCVVVVPFCCR 189


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 563 PSPNSVPMPVLAPLSSGPFSGLRP 634
           P P  VPMP+   +  G   G++P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQP 242


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 557 PAPSPNSVPMPVLAPLSSGPFSG 625
           PAP P     P  +PL+ GP  G
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGG 605


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,239
Number of Sequences: 2352
Number of extensions: 14313
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)