Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0775
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.77 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.77 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   1.0  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    25   1.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   9.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 378  PFFVDVRIALRLIASLYRIFVA-EILGVQW 292
            PF+ DV++ L LI +   + VA  I+ ++W
Sbjct: 1606 PFYADVKVMLPLIVATVALVVAVVIVALRW 1635



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 187  STTAHNIAPMPEIRPAPKR 243
            S+T+ +I+PM E +  P+R
Sbjct: 1823 SSTSSDISPMSEQKSLPRR 1841


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 378  PFFVDVRIALRLIASLYRIFVA-EILGVQW 292
            PF+ DV++ L LI +   + VA  I+ ++W
Sbjct: 1602 PFYADVKVMLPLIVATVALVVAVVIVALRW 1631



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 187  STTAHNIAPMPEIRPAPKR 243
            S+T+ +I+PM E +  P+R
Sbjct: 1819 SSTSSDISPMSEQKSLPRR 1837


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
 Frame = +2

Query: 248 SHRTKKNSSDNT*NYH*TPNISATKIRYNDAINRSAIRTSTKNGSNSAEACHAGPR-KEN 424
           S   ++NS  N   Y      S  K R  D   R   R      S S +  H     K N
Sbjct: 42  SREREQNSYKNEKEYRKYRETS--KERSRDRTERERSREPKIISSLSNKTIHNNNNYKYN 99

Query: 425 FNSKVNYNTTKRN 463
           +N+K NYN    N
Sbjct: 100 YNNKYNYNNNNYN 112


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 317 TKIRYNDAINRSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYN 448
           +K R+ D   R   + S    S S +  H     +N+N K+ YN
Sbjct: 296 SKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNYNKKLYYN 339


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +2

Query: 347 RSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKI 487
           R   R S  N   S     A   +E+ +S+ N+N      SH+   +
Sbjct: 228 RERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +2

Query: 347 RSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKI 487
           R   R S  N   S     A   +E+ +S+ N+N      SH+   +
Sbjct: 228 RERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/70 (21%), Positives = 26/70 (37%)
 Frame = +2

Query: 428 NSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLS 607
           N  ++ N    N +++N+       NY +   L      I   P P P  +      P  
Sbjct: 320 NKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNIINIEQIPVPVPVPIYCGNFPPRP 379

Query: 608 SGPFSGLRPQ 637
            GP+  ++ Q
Sbjct: 380 MGPWISIQEQ 389


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +2

Query: 347 RSAIRTSTKNGSNSAEACHAGPRKENFNSKVNYNTTKRNCSHSNSKI 487
           R   R S  N   S     A   +E+ +S+ N+N      SH+   +
Sbjct: 228 RERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,937
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)