Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0775
(755 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 30 1.4
At3g56760.1 68416.m06313 calcium-dependent protein kinase, putat... 30 1.4
At3g26932.1 68416.m03370 double-stranded RNA-binding domain (DsR... 29 4.4
At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 28 5.8
At5g52545.1 68418.m06521 expressed protein 28 5.8
At5g51500.1 68418.m06387 pectinesterase family protein contains ... 28 5.8
At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family prot... 28 5.8
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 28 5.8
At1g63570.1 68414.m07186 receptor-like protein kinase-related co... 28 5.8
At1g53940.1 68414.m06143 GDSL-motif lipase/hydrolase family prot... 28 5.8
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 28 5.8
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 28 5.8
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 28 5.8
At5g25090.1 68418.m02973 plastocyanin-like domain-containing pro... 28 7.7
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 7.7
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 28 7.7
>At3g61440.1 68416.m06881 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to cysteine synthase
(EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 368
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 300 PLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPA----TPAQEKKILIQKSITI 449
PL+FL + + AA+ EH Q T I +PA A++KK++I T+
Sbjct: 61 PLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTTL 114
>At3g56760.1 68416.m06313 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase CaMK3 [Nicotiana tabacum]
gi|16904226|gb|AAL30820
Length = 577
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = +2
Query: 398 CHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNS 577
CH P ++ + N + +S+ K KS + SP+PL + + + S +S
Sbjct: 4 CHGKPIEQQSKNLPISNEIEETPKNSSQKAKSSGFPFYSPSPLPSLFKTSPAVSSSSVSS 63
Query: 578 VPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPN 676
P+ + P + +L R S PN
Sbjct: 64 TPLRIFKRPFPPPSPAKHIRALLARRHGSVKPN 96
>At3g26932.1 68416.m03370 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 301
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 446 NTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601
++ +RNC S N++ AP I+ I + AP P P P +P
Sbjct: 232 SSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNPNSSP 283
>At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical
to gi:3883120 gb:AAC77823
Length = 131
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP---LSSGPFSGLRPQ 637
+SPAP I+PAPSP + P AP S P + L P+
Sbjct: 23 QSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSPAAALTPE 68
>At5g52545.1 68418.m06521 expressed protein
Length = 132
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 401 HAGPRKENFNSKVNYNTT-KRNCSHSNSKI 487
HAG RKEN +++NT K N S SK+
Sbjct: 13 HAGQRKENLGVMLSFNTALKSNLLISTSKV 42
>At5g51500.1 68418.m06387 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 540
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 684 NFIFGNVEVVXRKSICCGRSPLKG 613
+FIFGN VV + I R PLKG
Sbjct: 376 DFIFGNAAVVFQNCIILPRLPLKG 399
>At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family protein
similar to lipase [Arabidopsis thaliana] GI:1145627;
contains Pfam profile PF00657: Lipase/Acylhydrolase with
GDSL-like motif
Length = 374
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 648 KSICCGRSPLKGPDERGARTGIGTEF 571
K CCG PL+G + G R G+ +
Sbjct: 300 KKACCGSGPLRGINTCGGRMGLSQSY 325
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601
ES +P K A PAP+P +P P AP
Sbjct: 10 ESESPAKVTTPAPADTPAPAPAEIPAPAPAP 40
>At1g63570.1 68414.m07186 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function DUF26; similar to receptor-like protein kinase
4 (GI:13506745) [Arabidopsis thaliana]
Length = 284
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSGLRPQ 637
+P + + + + +PAPSP+S +P ++P SS P S L PQ
Sbjct: 232 TPKCILRYRTFVLPSPAPSPSS--LPPISPTSSPPLS-LPPQ 270
>At1g53940.1 68414.m06143 GDSL-motif lipase/hydrolase family protein
similar to lipase GI:1145627 from (Arabidopsis
thaliana); contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 436
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 648 KSICCGRSPLKGPDERGARTGIGTEF 571
K CCG PL+G + G R G+ +
Sbjct: 302 KMACCGTGPLRGINTCGGRMGVSQSY 327
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601
+PAP A AP+P+P S P+P AP
Sbjct: 296 TPAPAPAPAPAPAPAPSPAPASAPVPAPAP 325
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601
+PAP A AP+P+P S P+P AP
Sbjct: 296 TPAPAPAPAPAPAPAPSPAPASAPVPAPAP 325
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +2
Query: 470 HSNSKIKS*ETNYESPAPLKKIKQEIAI------APAPSPNSV-PMPVLAPLSSGPFSGL 628
H NS+ K + S K+K+E+A+ P+PSP+ + P P L P S L
Sbjct: 187 HQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPSPSPSRLPPTPPLPKFLVSPASSL 246
>At5g25090.1 68418.m02973 plastocyanin-like domain-containing
protein
Length = 186
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 554 APAPSPNSVPMPVLAPLSSGPFSGLRPQ 637
+PAPSP + P +AP S G S L Q
Sbjct: 144 SPAPSPALLGAPTVAPASGGSASSLTRQ 171
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 515 PAPLKKIKQEIAIAPAPSP--NSVPMPVLAPLSSGP 616
P P + ++ P P+P +S P PV AP++ P
Sbjct: 92 PVPAPMVSSPVSSPPVPAPVADSPPAPVAAPVADVP 127
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 548 AIAPAPSPNSVPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPN 676
A APAPSP++ P P AP ++ P S P + TST P+
Sbjct: 45 ATAPAPSPSANP-PPSAPTTAPPVS-QPPTESPPAPPTSTSPS 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,475,997
Number of Sequences: 28952
Number of extensions: 304132
Number of successful extensions: 1243
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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