BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0775 (755 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 30 1.4 At3g56760.1 68416.m06313 calcium-dependent protein kinase, putat... 30 1.4 At3g26932.1 68416.m03370 double-stranded RNA-binding domain (DsR... 29 4.4 At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 28 5.8 At5g52545.1 68418.m06521 expressed protein 28 5.8 At5g51500.1 68418.m06387 pectinesterase family protein contains ... 28 5.8 At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family prot... 28 5.8 At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 28 5.8 At1g63570.1 68414.m07186 receptor-like protein kinase-related co... 28 5.8 At1g53940.1 68414.m06143 GDSL-motif lipase/hydrolase family prot... 28 5.8 At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 28 5.8 At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 28 5.8 At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 28 5.8 At5g25090.1 68418.m02973 plastocyanin-like domain-containing pro... 28 7.7 At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 7.7 At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 28 7.7 >At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative identical to cysteine synthase (EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme Length = 368 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = +3 Query: 300 PLIFLQQKSGTMMQLTAAQFEHLQKTGQIVQKPA----TPAQEKKILIQKSITI 449 PL+FL + + AA+ EH Q T I +PA A++KK++I T+ Sbjct: 61 PLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTTL 114 >At3g56760.1 68416.m06313 calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820 Length = 577 Score = 30.3 bits (65), Expect = 1.4 Identities = 21/93 (22%), Positives = 37/93 (39%) Frame = +2 Query: 398 CHAGPRKENFNSKVNYNTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNS 577 CH P ++ + N + +S+ K KS + SP+PL + + + S +S Sbjct: 4 CHGKPIEQQSKNLPISNEIEETPKNSSQKAKSSGFPFYSPSPLPSLFKTSPAVSSSSVSS 63 Query: 578 VPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPN 676 P+ + P + +L R S PN Sbjct: 64 TPLRIFKRPFPPPSPAKHIRALLARRHGSVKPN 96 >At3g26932.1 68416.m03370 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif Length = 301 Score = 28.7 bits (61), Expect = 4.4 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +2 Query: 446 NTTKRNCSHSNSKIKS*ETNYESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601 ++ +RNC S N++ AP I+ I + AP P P P +P Sbjct: 232 SSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNPNSSP 283 >At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical to gi:3883120 gb:AAC77823 Length = 131 Score = 28.3 bits (60), Expect = 5.8 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +2 Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP---LSSGPFSGLRPQ 637 +SPAP I+PAPSP + P AP S P + L P+ Sbjct: 23 QSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSPAAALTPE 68 >At5g52545.1 68418.m06521 expressed protein Length = 132 Score = 28.3 bits (60), Expect = 5.8 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +2 Query: 401 HAGPRKENFNSKVNYNTT-KRNCSHSNSKI 487 HAG RKEN +++NT K N S SK+ Sbjct: 13 HAGQRKENLGVMLSFNTALKSNLLISTSKV 42 >At5g51500.1 68418.m06387 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase Length = 540 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 684 NFIFGNVEVVXRKSICCGRSPLKG 613 +FIFGN VV + I R PLKG Sbjct: 376 DFIFGNAAVVFQNCIILPRLPLKG 399 >At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif Length = 374 Score = 28.3 bits (60), Expect = 5.8 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -3 Query: 648 KSICCGRSPLKGPDERGARTGIGTEF 571 K CCG PL+G + G R G+ + Sbjct: 300 KKACCGSGPLRGINTCGGRMGLSQSY 325 >At3g61260.1 68416.m06856 DNA-binding family protein / remorin family protein similar to DNA-binding protein gi|601843 [Arabidopsis thaliana], remorin [Solanum tuberosum] GI:1881585; contains Pfam profiles PF03763: Remorin C-terminal region, PF03766: Remorin N-terminal region Length = 212 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 509 ESPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601 ES +P K A PAP+P +P P AP Sbjct: 10 ESESPAKVTTPAPADTPAPAPAEIPAPAPAP 40 >At1g63570.1 68414.m07186 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function DUF26; similar to receptor-like protein kinase 4 (GI:13506745) [Arabidopsis thaliana] Length = 284 Score = 28.3 bits (60), Expect = 5.8 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAPLSSGPFSGLRPQ 637 +P + + + + +PAPSP+S +P ++P SS P S L PQ Sbjct: 232 TPKCILRYRTFVLPSPAPSPSS--LPPISPTSSPPLS-LPPQ 270 >At1g53940.1 68414.m06143 GDSL-motif lipase/hydrolase family protein similar to lipase GI:1145627 from (Arabidopsis thaliana); contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif Length = 436 Score = 28.3 bits (60), Expect = 5.8 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -3 Query: 648 KSICCGRSPLKGPDERGARTGIGTEF 571 K CCG PL+G + G R G+ + Sbjct: 302 KMACCGTGPLRGINTCGGRMGVSQSY 327 >At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding protein-like f-AtMBP [Arabidopsis thaliana]; similar to myrosinase binding protein GI:1711295 from [Brassica napus]; contains Pfam PF01419: Jacalin-like lectin domain; identical to cDNA myrosinase-binding protein-like protein (MBP1.2) GI:6760446 Length = 642 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601 +PAP A AP+P+P S P+P AP Sbjct: 296 TPAPAPAPAPAPAPAPSPAPASAPVPAPAP 325 >At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding protein-like f-AtMBP [Arabidopsis thaliana]; similar to myrosinase binding protein GI:1711295 from [Brassica napus]; contains Pfam PF01419: Jacalin-like lectin domain; identical to cDNA myrosinase-binding protein-like protein (MBP1.2) GI:6760446 Length = 642 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 Query: 512 SPAPLKKIKQEIAIAPAPSPNSVPMPVLAP 601 +PAP A AP+P+P S P+P AP Sbjct: 296 TPAPAPAPAPAPAPAPSPAPASAPVPAPAP 325 >At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family protein Length = 558 Score = 28.3 bits (60), Expect = 5.8 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +2 Query: 470 HSNSKIKS*ETNYESPAPLKKIKQEIAI------APAPSPNSV-PMPVLAPLSSGPFSGL 628 H NS+ K + S K+K+E+A+ P+PSP+ + P P L P S L Sbjct: 187 HQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPSPSPSRLPPTPPLPKFLVSPASSL 246 >At5g25090.1 68418.m02973 plastocyanin-like domain-containing protein Length = 186 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 554 APAPSPNSVPMPVLAPLSSGPFSGLRPQ 637 +PAPSP + P +AP S G S L Q Sbjct: 144 SPAPSPALLGAPTVAPASGGSASSLTRQ 171 >At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical to gi_11935088_gb_AAG41964 Length = 209 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +2 Query: 515 PAPLKKIKQEIAIAPAPSP--NSVPMPVLAPLSSGP 616 P P + ++ P P+P +S P PV AP++ P Sbjct: 92 PVPAPMVSSPVSSPPVPAPVADSPPAPVAAPVADVP 127 >At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical to gi_3883128_gb_AAC77827 Length = 133 Score = 27.9 bits (59), Expect = 7.7 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +2 Query: 548 AIAPAPSPNSVPMPVLAPLSSGPFSGLRPQQMLXRXTTSTLPN 676 A APAPSP++ P P AP ++ P S P + TST P+ Sbjct: 45 ATAPAPSPSANP-PPSAPTTAPPVS-QPPTESPPAPPTSTSPS 85 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,475,997 Number of Sequences: 28952 Number of extensions: 304132 Number of successful extensions: 1243 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1083 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1206 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1682736544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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