BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0774 (668 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.9 AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 3.8 M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 6.6 DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 8.7 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 24.6 bits (51), Expect = 2.9 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Frame = -2 Query: 334 FGHLVH-ALGRAAGGAKLPSAGLCLNASRPKP 242 + L+H A+G GG L G CL R P Sbjct: 936 YSFLMHTAVGHGGGGQSLSGPGSCLEDFRATP 967 >AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase protein. Length = 973 Score = 24.2 bits (50), Expect = 3.8 Identities = 16/58 (27%), Positives = 23/58 (39%) Frame = +1 Query: 127 RRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALRRSGIIPRMVASHHR 300 RRR + E +SHC+E S + R L RS + ++ AS R Sbjct: 268 RRRAYWWTTEIAQCRSHCIEARRKMNRAKSSEQREDLRRLYILARSNLKRKIKASKRR 325 >M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 574 Score = 23.4 bits (48), Expect = 6.6 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = +2 Query: 488 IGRADIEDQKATSL*TLGCHKPVIPVVTFLAPC*KLFILKDR*AV 622 I D + LG + T LAPC KLF + R A+ Sbjct: 47 IANVGYRDGSTREIDPLGARATSVDCRTSLAPCSKLFAAEPRVAL 91 >DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. Length = 847 Score = 23.0 bits (47), Expect = 8.7 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -1 Query: 206 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 99 + R GSK S + S+ E RR+P RSM Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 700,438 Number of Sequences: 2352 Number of extensions: 13009 Number of successful extensions: 32 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 66904800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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