Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0774
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    31   0.56 
AL031633-25|CAI06057.1|  354|Caenorhabditis elegans Hypothetical...    29   2.3  
AL031633-2|CAD60426.1|  388|Caenorhabditis elegans Hypothetical ...    29   2.3  
AL031633-1|CAA21019.3|  386|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC006636-2|AAF39797.1|  325|Caenorhabditis elegans Hypothetical ...    29   2.3  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical...    29   3.9  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    28   5.2  
AF125459-13|AAD12833.1|  605|Caenorhabditis elegans Hypothetical...    28   6.9  

>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 311 RPSGRWCEATIRGIMPERLKAEASLAESGKDMLTVEPRE 195
           RPSG WC     GI   +++AE + A  G  +  ++ R+
Sbjct: 93  RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 REEPQFRTFGSCTRPSGRWCEATIRGIMPERLKAEASLAESGKDMLTVE-PRES 192
           R EP +R F    RPSG WC     G    +  AEA+    G  +  ++ P+E+
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTGFHAAKADAEAACQAVGATLSGLQNPQEA 305


>AL031633-25|CAI06057.1|  354|Caenorhabditis elegans Hypothetical
           protein Y39A1A.1c protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 505 RRSKSNVAMNAWLPQASYPCGNFSGTLLKTLYTKGSIGRAF 627
           R SKS + + A L   +    N  GTL+ T  TKG++ R F
Sbjct: 175 RESKSPIVIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVF 215


>AL031633-2|CAD60426.1|  388|Caenorhabditis elegans Hypothetical
           protein Y39A1A.1b protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 505 RRSKSNVAMNAWLPQASYPCGNFSGTLLKTLYTKGSIGRAF 627
           R SKS + + A L   +    N  GTL+ T  TKG++ R F
Sbjct: 207 RESKSPIVIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVF 247


>AL031633-1|CAA21019.3|  386|Caenorhabditis elegans Hypothetical
           protein Y39A1A.1a protein.
          Length = 386

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 505 RRSKSNVAMNAWLPQASYPCGNFSGTLLKTLYTKGSIGRAF 627
           R SKS + + A L   +    N  GTL+ T  TKG++ R F
Sbjct: 207 RESKSPIVIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVF 247


>AC006636-2|AAF39797.1|  325|Caenorhabditis elegans Hypothetical
           protein F40C5.1 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 202 GSTVSISLPDSARLASALRRSGIIPRMVASHHRPLGRVHEPNVRNCG 342
           GS     +  +ARLA  LR+ G+   +V   H+ +  +   +++NCG
Sbjct: 207 GSDTEERVSSAARLADILRKQGVRGSLVEKIHKNILSMFLKDLQNCG 253


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
            protein Y18D10A.1 protein.
          Length = 1634

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 187  PPDSRGSTVSISLPDSARLASALRRSGIIPRMVASHHRPLGR 312
            PP S  ST   S PDSA   S++++ G    + A   RP G+
Sbjct: 1149 PPSSSSSTEPPSAPDSASTTSSMKKGGGAIMIEAVPCRPGGK 1190


>AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical
           protein Y25C1A.4 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 311 RPSGRWCEATIRGIMPERLKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 147
           R SG WC     G    ++ AEA+  + G  +  +E +E     Q    +R+S +
Sbjct: 370 RQSGGWCMKVFTGFHAAKVDAEAACKDVGATLSGLENKEEAIFIQNALLARISQA 424


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -1

Query: 311 RPSGRWCEATIRGIMPERLKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 147
           RPSG WC     G    +  AE S    G  +  ++ R      Q    ++++ S
Sbjct: 49  RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103


>AF125459-13|AAD12833.1|  605|Caenorhabditis elegans Hypothetical
           protein Y25C1A.3 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/63 (23%), Positives = 28/63 (44%)
 Frame = -1

Query: 344 EPQFRTFGSCTRPSGRWCEATIRGIMPERLKAEASLAESGKDMLTVEPRESGGSKQCDFT 165
           EP ++ F    RPSG WC     G    ++ AE +   +G  +  ++ ++     Q    
Sbjct: 376 EPGYKRFN---RPSGPWCIKVFTGYFAAQIDAERACQAAGGALTGLQNQDEALYIQSSLL 432

Query: 164 SRV 156
           S++
Sbjct: 433 SQI 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,413,735
Number of Sequences: 27780
Number of extensions: 311213
Number of successful extensions: 766
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)