BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0774 (668 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 30 1.2 At1g67970.1 68414.m07764 heat shock factor protein, putative (HS... 29 3.7 At3g60750.1 68416.m06796 transketolase, putative strong similari... 28 6.5 At2g17550.1 68415.m02031 expressed protein 28 6.5 >At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein / hsp20 family protein contains Pfam profile: PF00011 Hsp20/alpha crystallin family Length = 285 Score = 30.3 bits (65), Expect = 1.2 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -2 Query: 283 PSAGLCLNASRPKPA*PNPARICSLWSPESREALNNVTLLVAFRIQNAR-RDVEAHLD 113 PS L RPK P A + ++WSP S A + + +VA + A D+ +D Sbjct: 159 PSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASINDIRVEVD 216 >At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) identical to heat shock transcription factor 5 (HSF5) SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam profile: PF00447 HSF-type DNA-binding domain Length = 374 Score = 28.7 bits (61), Expect = 3.7 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = -1 Query: 302 GRWCEATIRGIMPERLKAEASLAESGKDMLTVEPRESGGSKQCD 171 G W + + ++ K + ++ + GKD LT+E E G+ + D Sbjct: 286 GAWEKLLLLSPSRKKTKKQENIVKKGKDDLTLEEEEEDGTMELD 329 >At3g60750.1 68416.m06796 transketolase, putative strong similarity to transketolase 1 [Capsicum annuum] GI:3559814; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain, PF00456: Transketolase, thiamine diphosphate binding domain Length = 741 Score = 27.9 bits (59), Expect = 6.5 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -2 Query: 400 SFTLLMACRXXSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGL 269 + TLL A ERN FG H +G G L S GL Sbjct: 462 NMTLLKAFGDFQKATPEERNLRFGVREHGMGAICNGIALHSPGL 505 >At2g17550.1 68415.m02031 expressed protein Length = 765 Score = 27.9 bits (59), Expect = 6.5 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +1 Query: 67 VMHVLRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLA 246 V ++ + T + + D N LRR+++ E E ++ EP + V + PD + Sbjct: 529 VDYLSQVSTPDVTVSDENELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588 Query: 247 SALRRSGI 270 L SG+ Sbjct: 589 DLLVASGL 596 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,696,298 Number of Sequences: 28952 Number of extensions: 298168 Number of successful extensions: 716 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 707 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 716 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1412971776 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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