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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0773
         (704 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)                    29   3.7  
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)                   29   3.7  
SB_7017| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.7  
SB_49565| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_48661| Best HMM Match : rve (HMM E-Value=5.7e-17)                   29   4.9  
SB_19905| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)                 28   6.4  
SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_37538| Best HMM Match : zf-CCHC (HMM E-Value=0.0011)                28   6.4  
SB_16016| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)                 28   8.5  
SB_16404| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)                 28   8.5  

>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 246

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 308 VVVAWDSVLGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPRRCAL 454
           V V   S     GR+A   S +  L +RR +P S   +C R++ RRCA+
Sbjct: 190 VTVYEGSTENPKGRKASVLSGFQRLANRR-RPESAKDECRRENERRCAI 237


>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
          Length = 1120

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 356 LPTSLYSGLLSRRPQPRSRGAQCARDHPRR 445
           LP S  S   S  PQP S     +RDHP R
Sbjct: 296 LPLSNQSSSTSTTPQPSSPATPSSRDHPTR 325


>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
          Length = 3616

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 550  TVEVSRRDRPELQGAPDHFQNTRLLTRFLRNERLL***FRSRRR 681
            T  ++ R RPE Q +PD+ ++   LT  + ++  +   FR RRR
Sbjct: 3394 TNNMAGRGRPEPQPSPDNTEDAHTLTSHMSSKAAICIHFRQRRR 3437


>SB_7017| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1017

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C+RDHPR
Sbjct: 139 LRAPGKTAPQYAQRSETKSQRRQPPDRCGYCSRDHPR 175


>SB_49565| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1571

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C RDHPR
Sbjct: 187 LRAPGKTAPQYAQRSETKSQRRQPPDRCGYCGRDHPR 223


>SB_48661| Best HMM Match : rve (HMM E-Value=5.7e-17)
          Length = 745

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C RDHPR
Sbjct: 22  LRAPGKTAPQYAQRSETKSQRRQPPDRCGYCGRDHPR 58


>SB_19905| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 587

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C RDHPR
Sbjct: 139 LRAPGKTAPQYAQRSETKSQRRQPPDRCGYCGRDHPR 175


>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
          Length = 1191

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C RDHPR
Sbjct: 189 LRAPGKTAPRYAQRSETKSQRRQPPDRCGYCGRDHPR 225


>SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 965

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 527 LERGRLXAQWKFRDATVPNCKELQIISRTRGCLRAFSEMNGFSNDDSGVEDE 682
           LE G+L     F D       E++++ + +G L AFSE+    +DD   +D+
Sbjct: 406 LELGKLTGCCDFADNVFKFGNEIEVL-QMKGRLEAFSEIESDDDDDDEDDDD 456


>SB_37538| Best HMM Match : zf-CCHC (HMM E-Value=0.0011)
          Length = 215

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 332 LGVSGRRALPTSLYSGLLSRRPQPRSRGAQCARDHPR 442
           L   G+ A   +  S   S+R QP  R   C RDHPR
Sbjct: 47  LRAPGKTAPQYAQRSETKSQRRQPPDRCEYCGRDHPR 83


>SB_16016| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)
          Length = 890

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 386 SRRPQPRSRGAQCARDHPR 442
           S+R QP  R   C RDHPR
Sbjct: 58  SQRRQPPDRCGYCGRDHPR 76


>SB_16404| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)
          Length = 765

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 386 SRRPQPRSRGAQCARDHPR 442
           S+R QP  R   C RDHPR
Sbjct: 40  SQRRQPPDRCGYCGRDHPR 58


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,201,858
Number of Sequences: 59808
Number of extensions: 390178
Number of successful extensions: 3663
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3660
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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