BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0773 (704 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U64608-5|AAB04596.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.4 AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical ... 29 3.2 AF047663-1|AAC04453.2| 322|Caenorhabditis elegans Delta/serrate... 27 9.9 >U64608-5|AAB04596.1| 393|Caenorhabditis elegans Hypothetical protein T22B7.7 protein. Length = 393 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 598 LELLAIRDGRVAKLPLCXQTTTLQEASHDRPYTS 497 +EL I+DG V +TTT+ + H+ PY S Sbjct: 240 IELPVIKDGEVTMNSTNVETTTIAQPEHENPYGS 273 >AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical protein F52C12.1 protein. Length = 451 Score = 29.1 bits (62), Expect = 3.2 Identities = 9/26 (34%), Positives = 19/26 (73%) Frame = -3 Query: 669 PESSLEKPFISEKARKQPRVLEMIWS 592 P S+ ++PF+++K ++P +L IW+ Sbjct: 424 PYSATDEPFVTDKKHEKPDILGCIWT 449 >AF047663-1|AAC04453.2| 322|Caenorhabditis elegans Delta/serrate/lag-2 domain protein2 protein. Length = 322 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/52 (23%), Positives = 23/52 (44%) Frame = -2 Query: 172 GHLTXNSFPRPLETPLINYETEQEXF*SFCLKRNSRDVTHVAVQRAIPRCVL 17 G + + PRP + ++ + E+ F +C K D H+ R + V+ Sbjct: 102 GIINVDQLPRPFDGMVVKVKCERNWFGEYCDKYCDEDAAHLVGMRCNKKGVM 153 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,327,496 Number of Sequences: 27780 Number of extensions: 267801 Number of successful extensions: 776 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 776 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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