Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0773
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 586 AIRDGRVAKLPLCXQTTTLQEASHDR 509
           A+R GRV K         +Q++SH R
Sbjct: 137 AVRFGRVPKREKARILAAMQQSSHSR 162


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +2

Query: 362 TSLYSGLLSRRPQPRSRGAQ--CARDHPRRCALGLCAPD*SSAKMGT 496
           T L  G+LS+ PQ    G Q    R  P    +G   P  ++A M T
Sbjct: 188 TRLLHGILSQHPQQHGLGVQNGYGRHLPGHAQMG--RPSYTTATMAT 232


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 312 WSRGTVCW 335
           WS G VCW
Sbjct: 822 WSMGIVCW 829


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,313
Number of Sequences: 438
Number of extensions: 3328
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)