Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0772
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F666 Cluster: Phytanoyl-CoA dioxygenase peroxisomal; ...    90   5e-17
UniRef50_Q6ZEH9 Cluster: Putative uncharacterized protein ssl701...    33   7.5  

>UniRef50_Q2F666 Cluster: Phytanoyl-CoA dioxygenase peroxisomal;
           n=1; Bombyx mori|Rep: Phytanoyl-CoA dioxygenase
           peroxisomal - Bombyx mori (Silk moth)
          Length = 300

 Score = 90.2 bits (214), Expect = 5e-17
 Identities = 55/97 (56%), Positives = 65/97 (67%)
 Frame = +1

Query: 112 MPIKGLKVLPNPVFSEXGHRTTGLSEEQKSFYWENGYLVIKELIDFTLLYS*QXRRLFXQ 291
           MP+KGLKVLPNPVFSE       LSEEQKSFYWENGYLVIKELIDFT LYS + R  F Q
Sbjct: 1   MPLKGLKVLPNPVFSELPQNYR-LSEEQKSFYWENGYLVIKELIDFTSLYSYKQR--FLQ 57

Query: 292 IWQRNS*QAPL*LFKETGHFLRRNLKXWKNTLNKASQ 402
           I  +    +P+ + KE   F  +NLK  +  +NK  +
Sbjct: 58  IC-KGIVDSPVMIVKEQALF-EKNLKP-EEYINKLQE 91


>UniRef50_Q6ZEH9 Cluster: Putative uncharacterized protein ssl7019;
           n=1; Synechocystis sp. PCC 6803|Rep: Putative
           uncharacterized protein ssl7019 - Synechocystis sp.
           (strain PCC 6803)
          Length = 85

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +2

Query: 455 FPQGYWDVDSSTVSLVDG--H*TGYSTAMVS-FQTKTPPRVTGPXXFPARHPGIYFYFSP 625
           +P G  +  S +  LV+G  H     T++ S FQ+++P  V G   FP    G+ + FSP
Sbjct: 22  YPGGKPEFQSRSPGLVEGKFHSQSLMTSLASWFQSRSPGLVEGKPGFPYLSDGVTYSFSP 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,353,871
Number of Sequences: 1657284
Number of extensions: 14192365
Number of successful extensions: 28812
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28802
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)