Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0772
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0138 + 18516689-18518161                                         30   2.3  
07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670           28   9.1  

>01_05_0138 + 18516689-18518161
          Length = 490

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 451 TIPPGLLGCGFFNSFIGGW 507
           +IP GL G  FF S+ GGW
Sbjct: 89  SIPAGLRGARFFGSYTGGW 107


>07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670
          Length = 438

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 739 GTLPXPAPINPFNWDHGVPTGPVPMEPLMNLY 644
           G LP PAP+ P    HG+ T  +   P ++LY
Sbjct: 334 GRLPAPAPVQP----HGISTQELQDTPQLSLY 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,726,705
Number of Sequences: 37544
Number of extensions: 389267
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)