BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0772 (749 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_22801| Best HMM Match : Dynein_heavy (HMM E-Value=1.5e-14) 29 5.3 SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_41099| Best HMM Match : VWA (HMM E-Value=0) 28 9.3 SB_24918| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 >SB_22801| Best HMM Match : Dynein_heavy (HMM E-Value=1.5e-14) Length = 478 Score = 28.7 bits (61), Expect = 5.3 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +3 Query: 393 GFPRKFLLTMDVFHGXY--GGNHSPRAIGMWILQQFHWWMDIKR-AIPQPW 536 G + L T D + + GN+S RA +++L FH M +R IPQ W Sbjct: 103 GIKKNMLRTYDSWSPEFVQRGNNSTRAQALFVLSWFHAIMQERRNYIPQGW 153 >SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1490 Score = 28.3 bits (60), Expect = 7.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELIDFTLL 258 L+E+ FY NG+ V+++L+D LL Sbjct: 1081 LTEKDVEFYNHNGFFVVRKLVDKELL 1106 >SB_41099| Best HMM Match : VWA (HMM E-Value=0) Length = 3373 Score = 27.9 bits (59), Expect = 9.3 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Frame = -2 Query: 724 PAPINPFNWDHGVPTGP-VPMEPLMNLYPTGXLNRGK 617 P PI P VPT P VP P +YP RGK Sbjct: 103 PQPITPKPVPPTVPTRPPVPRPPAAAVYPLDKRRRGK 139 >SB_24918| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 336 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 464 GYWDVDSSTVSLVDGH*TGYSTAMV 538 G W +DSS + LV+ H G ST+ V Sbjct: 7 GSWSLDSSKIRLVNWHLNGKSTSYV 31 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,906,565 Number of Sequences: 59808 Number of extensions: 411578 Number of successful extensions: 845 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 845 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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