BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0772 (749 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. 31 3.3 BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 31 3.3 AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 31 3.3 AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 31 3.3 AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 31 3.3 AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxyla... 31 3.3 AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hyd... 31 3.3 AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-C... 31 3.3 AK125272-1|BAC86107.1| 278|Homo sapiens protein ( Homo sapiens ... 30 7.7 >CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxylase protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxylase protein. Length = 321 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 34 LTLEQRKFYEENGFLVIKNLV 54 >AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxylase protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxylase protein. Length = 296 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 71 LTLEQRKFYEENGFLVIKNLV 91 >AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxylase protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hydroxylase protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-CoA alpha-hydroxylase protein. Length = 338 Score = 31.5 bits (68), Expect = 3.3 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 181 LSEEQKSFYWENGYLVIKELI 243 L+ EQ+ FY ENG+LVIK L+ Sbjct: 53 LTLEQRKFYEENGFLVIKNLV 73 >AK125272-1|BAC86107.1| 278|Homo sapiens protein ( Homo sapiens cDNA FLJ43282 fis, clone LIVER2007415. ). Length = 278 Score = 30.3 bits (65), Expect = 7.7 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 700 WDHGVPTGPVPMEPLM 653 WDHGV G +P+EPL+ Sbjct: 166 WDHGVSRGALPLEPLV 181 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 111,664,648 Number of Sequences: 237096 Number of extensions: 2376690 Number of successful extensions: 3762 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3620 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3762 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9015132854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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