Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0772
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    31   0.66 
Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = +1

Query: 109 KMPIKGLKVLPNPVFSEXGHRTTGLSEEQKSFYWENGYLVI 231
           ++P++  +VLPNP++ E G ++   +EE K+F    GY+ I
Sbjct: 201 ELPLESDEVLPNPIYEEPGDQSE--TEEVKAFREIFGYIQI 239


>Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 181 LSEEQKSFYWENGYLVIKELI 243
           LS EQ+ FY +NGYL+I+  +
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCV 36


>Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 181 LSEEQKSFYWENGYLVIKELI 243
           LS EQ+ FY +NGYL+I+  +
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCV 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,484,841
Number of Sequences: 27780
Number of extensions: 336332
Number of successful extensions: 638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)