BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0771
(679 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 26 0.95
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 26 0.95
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 25 1.7
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 6.7
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 23 8.9
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 23 8.9
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 26.2 bits (55), Expect = 0.95
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 126 PHATRTRTPASTP 164
PHAT T+TP +TP
Sbjct: 705 PHATTTKTPTTTP 717
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 26.2 bits (55), Expect = 0.95
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 126 PHATRTRTPASTP 164
PHAT T+TP +TP
Sbjct: 704 PHATTTKTPTTTP 716
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 105 APRYYXPPHATRTRTPA 155
+P YY PPHA PA
Sbjct: 514 SPAYYEPPHAYELNPPA 530
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 399 FGNRFNLESI*LFYKKGKYVFKRE 328
+G +FN I + K G+Y+ K E
Sbjct: 469 YGRKFNYMKIGISVKSGRYIPKEE 492
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 23.0 bits (47), Expect = 8.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 239 MRLTNYQRCADAESS*LTQLNGP 307
+ L NYQRCA+ S+ L L P
Sbjct: 328 LALENYQRCAEDCSTALELLQPP 350
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 23.0 bits (47), Expect = 8.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 239 MRLTNYQRCADAESS*LTQLNGP 307
+ L NYQRCA+ S+ L L P
Sbjct: 328 LALENYQRCAEDCSTALELLQPP 350
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,107
Number of Sequences: 2352
Number of extensions: 9765
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -