Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0770
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q26DI6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_A0DFC9 Cluster: Chromosome undetermined scaffold_49, wh...    32   9.6  

>UniRef50_Q26DI6 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 296

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 320 LIYGTEVNINSEDTLYLVHSYRATL 394
           L Y T++  N E  +YLVHSY ATL
Sbjct: 32  LFYATQLFPNEESHIYLVHSYEATL 56


>UniRef50_A0DFC9 Cluster: Chromosome undetermined scaffold_49, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_49,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 678

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 311 KVFLIYGTEVNINSEDTLYLVHSYRATLLH 400
           K + I+GT  NI  E+  YL  +Y +TLLH
Sbjct: 41  KYYYIFGTNSNIQVENQYYLNSNYTSTLLH 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,579,289
Number of Sequences: 1657284
Number of extensions: 7833375
Number of successful extensions: 15443
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15442
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)