BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0769 (744 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 35 0.078 11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 33 0.24 11_06_0476 + 24044255-24044431,24046902-24046958,24047095-240471... 29 2.9 07_03_0574 - 19629875-19631032 28 9.0 >12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-320458, 321211-321298,321401-321461,321542-321625,322332-322630 Length = 255 Score = 34.7 bits (76), Expect = 0.078 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Frame = +1 Query: 400 FFDAATEEREHATKLIDYLLMRG---KLTGSVTDLITYRAPPTRRGRAAHQPSSTPSSWR 570 F +++ EER+HA KL+ Y MRG +L VT L + P +G A + + + Sbjct: 130 FKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPLTEFDHP--EKGDALYAMELALALEK 187 Query: 571 VXXXXXXXXXXXXXXXXFNDYHLVDYLSGEFLDEQ 675 + ND L D++ EFL+EQ Sbjct: 188 LVNEKLHNLHSVASRC--NDPQLTDFVESEFLEEQ 220 Score = 28.7 bits (61), Expect = 5.2 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 284 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400 C + +QI E AS Y ++ AYF D V GFA + Sbjct: 91 CEAAISEQINVEFNASYAYHSLFAYFDRDNVALKGFAKF 129 >11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-305640, 305744-305804,305885-306018,306310-306654 Length = 281 Score = 33.1 bits (72), Expect = 0.24 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Frame = +1 Query: 400 FFDAATEEREHATKLIDYLLMRG---KLTGSVTDLITYRAPPTRRGRAAHQPSSTPSSWR 570 F +++ EER+HA KLI Y MRG +L VT L + P +G A + Sbjct: 162 FKESSDEERDHAEKLIKYQNMRGGRVRLQSIVTPLTEFDHP--EKGDALY--------GE 211 Query: 571 VXXXXXXXXXXXXXXXXFNDYHLVDYLSGEFLDEQ 675 + ND L D++ EFL+EQ Sbjct: 212 LLSACPIYVFYSMVASRCNDPQLTDFVESEFLEEQ 246 >11_06_0476 + 24044255-24044431,24046902-24046958,24047095-24047140, 24047195-24047310 Length = 131 Score = 29.5 bits (63), Expect = 2.9 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Frame = +2 Query: 236 RQPRHHRDEWLTMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXYSSMLR 415 + P+H + + E T Y M +QE + Y+ Y+ I P Y + Sbjct: 29 QMPQHEKKRYFG-EDTIYKMYNNPLQERSRKKLVYIFWDRYYLIGNEQHPDKVDYPIFII 87 Query: 416 LKNA---STRPSSLTT 454 LK T P+S T Sbjct: 88 LKKVLEDETPPNSTWT 103 >07_03_0574 - 19629875-19631032 Length = 385 Score = 27.9 bits (59), Expect = 9.0 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = -2 Query: 353 PPWLSTGLTRPLPPGXXXXXXXXXSAPW*ATHPDGDG-ADVTLCS 222 PP+ G+ RPLP + W T P DG A V CS Sbjct: 164 PPYADDGIGRPLPGSRVTALAVVGAGIWTTTAPAEDGVASVRPCS 208 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,467,031 Number of Sequences: 37544 Number of extensions: 377978 Number of successful extensions: 1021 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1021 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1968901276 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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