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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0769
         (744 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)               33   0.24 
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.43 
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.99 
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.99 
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)                      29   4.0  
SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)                 28   9.2  
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)                     28   9.2  

>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 489 RPHHVQGPANTSWESGASALEHALKLESDVTNSIREVIKTCE 614
           R H  + P    W SG  A++ AL LE  V  ++ E+ KT E
Sbjct: 59  REHAEKKPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAE 100



 Score = 31.9 bits (69), Expect = 0.56
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 278 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGF 391
           + C   + KQI  E+ AS  Y +M  YF  + V+ PGF
Sbjct: 10  EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGF 47


>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 278 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400
           + C   + KQI  E+ AS  YL+M  +F  D V  PGF  Y
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKY 237



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468
           P   + F  A+ EEREHA KL+ +   RG
Sbjct: 232 PGFHKYFLKASHEEREHAEKLMKFQNERG 260


>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
          Length = 126

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGF 391
           + KQI +E+ A   YL+M  +F  D +N PGF
Sbjct: 38  INKQINKELYAHYTYLSMAFHFDRDDINLPGF 69


>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468
           P   + F +A+ EEREHA KL  + L RG
Sbjct: 179 PGFHKYFMEASHEEREHAEKLAKFQLQRG 207



 Score = 31.1 bits (67), Expect = 0.99
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400
           + KQI  E+ AS  Y++M  +F  D V  PGF  Y
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKY 184


>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400
           + KQI  E+ AS  Y++M  +F  D V  PGF  Y
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKY 169



 Score = 31.1 bits (67), Expect = 0.99
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468
           P   + F  A+ EEREHA KL  + L RG
Sbjct: 164 PGFHKYFMKASHEEREHAEKLAKFQLQRG 192


>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 135

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400
           + KQI  E+ AS  Y++M  +F  D V  PGF  Y
Sbjct: 18  VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKY 52



 Score = 31.1 bits (67), Expect = 0.99
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468
           P   + F  A+ EEREHA KL  + L RG
Sbjct: 47  PGFHKYFIKASHEEREHAEKLAKFQLQRG 75


>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
          Length = 2352

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 415  TEEREHATKLIDYLLMRGKLTGSVTDLITYRAPPTRRG 528
            ++ RE A + I   L+   LTGS T++I  R P   RG
Sbjct: 1841 SDHREQAAQEIQAFLLDMILTGSKTEIIELRGPDKPRG 1878


>SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)
          Length = 315

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 495 HHVQGPANTSWESGASALEHALKLESDVTNSIREVIKTCES 617
           HH+  P  ++  SG S     L LES  T ++RE   TC++
Sbjct: 198 HHIDQPIVSNLLSGTSGRSTPLGLESACTRAVRE---TCDA 235


>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
          Length = 1230

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 316 GSGRVNPV--LSHGGLLLDRYGEPPRLREXFFDAATEERE 429
           GSG+   +  L  GGL+ D+YG  PR  +  F A  E ++
Sbjct: 672 GSGKTYTIGGLDTGGLMDDQYGIIPRAVKQIFQAFEESKQ 711


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,341,177
Number of Sequences: 59808
Number of extensions: 390359
Number of successful extensions: 889
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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