BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0769 (744 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18 SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18 SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.24 SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43 SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99 SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99 SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 29 4.0 SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) 28 9.2 SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 28 9.2 >SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 394 Score = 33.5 bits (73), Expect = 0.18 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +3 Query: 489 RPHHVQGPANTSWESGASALEHALKLESDVTNSIREVIKTCE 614 R H + P W SG A++ AL LE V ++ E+ KT E Sbjct: 59 REHAEKKPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAE 100 Score = 31.9 bits (69), Expect = 0.56 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +2 Query: 278 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGF 391 + C + KQI E+ AS Y +M YF + V+ PGF Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGF 47 >SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 33.5 bits (73), Expect = 0.18 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 Query: 278 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400 + C + KQI E+ AS YL+M +F D V PGF Y Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKY 237 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468 P + F A+ EEREHA KL+ + RG Sbjct: 232 PGFHKYFLKASHEEREHAEKLMKFQNERG 260 >SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) Length = 126 Score = 33.1 bits (72), Expect = 0.24 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGF 391 + KQI +E+ A YL+M +F D +N PGF Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGF 69 >SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 304 Score = 32.3 bits (70), Expect = 0.43 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468 P + F +A+ EEREHA KL + L RG Sbjct: 179 PGFHKYFMEASHEEREHAEKLAKFQLQRG 207 Score = 31.1 bits (67), Expect = 0.99 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400 + KQI E+ AS Y++M +F D V PGF Y Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKY 184 >SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 289 Score = 31.1 bits (67), Expect = 0.99 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400 + KQI E+ AS Y++M +F D V PGF Y Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKY 169 Score = 31.1 bits (67), Expect = 0.99 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468 P + F A+ EEREHA KL + L RG Sbjct: 164 PGFHKYFMKASHEEREHAEKLAKFQLQRG 192 >SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 135 Score = 31.1 bits (67), Expect = 0.99 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 296 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAXY 400 + KQI E+ AS Y++M +F D V PGF Y Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKY 52 Score = 31.1 bits (67), Expect = 0.99 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 382 PRLREXFFDAATEEREHATKLIDYLLMRG 468 P + F A+ EEREHA KL + L RG Sbjct: 47 PGFHKYFIKASHEEREHAEKLAKFQLQRG 75 >SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) Length = 2352 Score = 29.1 bits (62), Expect = 4.0 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 415 TEEREHATKLIDYLLMRGKLTGSVTDLITYRAPPTRRG 528 ++ RE A + I L+ LTGS T++I R P RG Sbjct: 1841 SDHREQAAQEIQAFLLDMILTGSKTEIIELRGPDKPRG 1878 >SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) Length = 315 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +3 Query: 495 HHVQGPANTSWESGASALEHALKLESDVTNSIREVIKTCES 617 HH+ P ++ SG S L LES T ++RE TC++ Sbjct: 198 HHIDQPIVSNLLSGTSGRSTPLGLESACTRAVRE---TCDA 235 >SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) Length = 1230 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 316 GSGRVNPV--LSHGGLLLDRYGEPPRLREXFFDAATEERE 429 GSG+ + L GGL+ D+YG PR + F A E ++ Sbjct: 672 GSGKTYTIGGLDTGGLMDDQYGIIPRAVKQIFQAFEESKQ 711 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,341,177 Number of Sequences: 59808 Number of extensions: 390359 Number of successful extensions: 889 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 889 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2010148439 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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