Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0769
         (744 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    36   0.037
At2g37070.1 68415.m04549 expressed protein                             28   7.5  
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    27   9.9  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 35.5 bits (78), Expect = 0.037
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
 Frame = +1

Query: 388 LREXFFDAATEEREHATKLIDYLLMRG---KLTGSVTDLITYRAPPTRRGRAAHQPSSTP 558
           L + F +++ EEREHA KL++Y   RG   KL   V  L  +      +G A +      
Sbjct: 132 LAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFE--HVDKGDALYGMELAL 189

Query: 559 SSWRVXXXXXXXXXXXXXXXXFNDYHLVDYLSGEFLDEQ 675
           S  ++                 ND HL D++  EFL EQ
Sbjct: 190 SLEKLVNEKLLNLHSVASKN--NDVHLADFIESEFLTEQ 226


>At2g37070.1 68415.m04549 expressed protein
          Length = 420

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 552 ARGLMRRSPTTCWRGPVRDEVGYGACQLAPHEQVVNELGRVLAFFSRSIEEXFAKPGRFT 373
           ARG + R+PT    GPV     +GAC  +P E   +   +     S++     ++  R  
Sbjct: 341 ARGSVARTPTGSCTGPVSGLSKHGAC--SPDEFTPSRTAKSQPTMSKAAVRPVSRSSRLI 398

Query: 372 VS 367
           VS
Sbjct: 399 VS 400


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 388 LREXFFDAATEEREHATKLIDYLLMRG 468
           L + F +++ EEREHA  L++Y   RG
Sbjct: 130 LAKFFKESSVEEREHAELLMEYQNKRG 156


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,960,564
Number of Sequences: 28952
Number of extensions: 262479
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)